Lucilia cuprina (Australian sheep blowfly): 111675344
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Entry
111675344 CDS
T06013
Name
(RefSeq) pre-mRNA-processing factor 19
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
lcq
Lucilia cuprina (Australian sheep blowfly)
Pathway
lcq03040
Spliceosome
lcq04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lcq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111675344
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111675344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcq03041
]
111675344
04121 Ubiquitin system [BR:
lcq04121
]
111675344
03400 DNA repair and recombination proteins [BR:
lcq03400
]
111675344
Enzymes [BR:
lcq01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111675344
Spliceosome [BR:
lcq03041
]
Complex B
Other components
Prp19 complex
111675344
Complex C
Prp19-CDC5 complex
111675344
Ubiquitin system [BR:
lcq04121
]
Ubiquitin ligases (E3)
U-box type E3
111675344
DNA repair and recombination proteins [BR:
lcq03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
111675344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
Prp19
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
WDR55
WD40_CDC20-Fz
WD40_Gbeta
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_WDR41
Beta-prop_Vps41
NBCH_WD40
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_SPT8
WDR90_beta-prop_4th
U-box
Tricorn_2nd
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_Nup120_160
Ge1_WD40
Beta-prop_ACSF4
Beta-prop_WDR35_TULP_N
Cytochrom_D1
B-prop_COPA_B_2nd
CoV_NSP15_N
zf-Nse
Motif
Other DBs
NCBI-GeneID:
111675344
NCBI-ProteinID:
XP_023291857
LinkDB
All DBs
Position
6:31397534..31405251
Genome browser
AA seq
507 aa
AA seq
DB search
MSLICAITNEVPDTPVISPHSGAIFEKRIIEKYILENGVDPITGKEMKAEELIEVKTPPI
VKPKPPTATSIPATLKTLQDEWDALMLHSFTQRQQLQTTRQELSHALYQHDAACRVIARL
NKEVAAAREALATLKPQVGIGATIAPTSIPQPAIASEAAGLAAQPIEQAGMSAEIIQKLQ
DKATVLTQERKKRGRTVPEELVTQDQIKTFLTVASHPGLHSASIPGILALDINSADHSKI
LTGGNDKNATVFNKDTEQVVAILKGHTKKITKVIYHPDEDTVITGSPDMSIRIWNVPTSQ
TQLLLRCHDGPITGLSLHPTGDYVLSTSSDKHWSFSDIRTGRLLTKVIDTAEVGLTTAQF
HPDGLIFGTGTDDSQVKIWDLKEQSNVANFPGHTGPISAISFSENGYYLATAADDACVKL
WDLRKLKNFKTIQLDDTYEVKDLCFDQSGTYLAIAGTDVRVYMCKQWQDLKVFNDHTALA
TGVRFGKNAQYIASTSMDRTLKLYSID
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtccttgatttgtgcaattacaaatgaggtgcccgatactcctgttatatctccacat
tcgggtgctattttcgagaaacgaataatagaaaagtatatattagaaaatggtgttgat
cccattaccggcaaagaaatgaaagcggaagaattaattgaagtgaaaacaccaccaatt
gtaaaaccgaagcctcctaccgctacaagcattcccgctacattgaaaacattacaagac
gaatgggacgctttaatgttgcactcgtttacgcagaggcagcagttgcaaacaacacgc
caggagttgtcgcacgctctttatcaacatgatgctgcttgtcgtgtaatagcgcgtctt
aacaaagaggtggcagctgcgcgagaagcgttagctacattgaaacctcaggttggcata
ggggcaactattgctccaacgtccattccacagcctgcaatcgcttcggaagcagccggt
cttgcagcacagcctattgaacaggctggaatgagtgcagaaattattcaaaagcttcag
gataaggccactgttcttacacaggaaagaaaaaaacgtggtcgcactgtaccagaagaa
ttagtaactcaagatcaaatcaagacatttcttactgtggcttcacatccaggcttgcat
tcagcttctataccaggtatattagcattggatatcaacagtgcagatcacagcaaaatt
ttgacgggtggtaatgacaagaatgccactgtatttaacaaggacacggaacaagttgtt
gccatactcaagggtcatacaaaaaaaattaccaaagttatatatcaccctgacgaggat
actgttattacgggatctcctgatatgtctattcgcatttggaacgtaccaacttcccag
acacaattgctattacgctgtcacgatggtccaataactggattatctttacatccaacg
ggtgattacgttctttccacttcttcggacaaacactggtcattttctgatattcgtact
ggtcgtttactaacaaaggttattgacacagcagaggttggtttaaccacagctcagttt
cacccagatggtttaatttttggtaccggcactgatgattcacaagtgaaaatttgggat
cttaaggaacaaagtaatgttgcaaactttccaggacatacaggtcctatatcagcaatt
tcattttctgagaatggttattaccttgctacagcagccgatgatgcttgcgtcaaattg
tgggatttgcgtaaacttaaaaattttaaaacaatacaactagacgatacttatgaagta
aaagatttatgttttgatcaaagtggaacatatttagcaatagcaggcactgatgtcaga
gtctatatgtgcaaacaatggcaagacttaaaagtgtttaatgatcatactgctctggca
actggagtacgttttggcaaaaacgctcaatatattgcatcgacaagtatggacagaact
ctaaaattatattcaattgattaa
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