Lucilia cuprina (Australian sheep blowfly): 111675443
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Entry
111675443 CDS
T06013
Name
(RefSeq) ataxin-2 homolog isoform X1
KO
K23625
ataxin 2/2L
Organism
lcq
Lucilia cuprina (Australian sheep blowfly)
Pathway
lcq04711
Circadian rhythm - fly
Brite
KEGG Orthology (KO) [BR:
lcq00001
]
09150 Organismal Systems
09159 Environmental adaptation
04711 Circadian rhythm - fly
111675443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcq03019
]
111675443
Messenger RNA biogenesis [BR:
lcq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
111675443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
Motif
Other DBs
NCBI-GeneID:
111675443
NCBI-ProteinID:
XP_023291976
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Position
4:73146409..73160573
Genome browser
AA seq
1137 aa
AA seq
DB search
MNNNKRKNRPSGGGGGGGGISTGGGISRYSNDNRQPNNKSRSQAQGIYNNAYFMHAATAL
VGNVVQMRLRSGNVYEGVFRTFSPNFDVALELPACIKLSKNSPDESKSVPNVMIFPYDTV
VSISAKDFDSQYATGGNFQTDAAISEKCNGSRFEEKELEPWDPSGINGEVDIVLDDATNG
WDANDMFRKNENTFGVQSTFDDSLSSYTVPLDKIDSDEFKEREAKAEKLAAEIENNPACR
DRLDLENGDEEAMFAAVARPDLERERERERERERERDLEREREREREREREERERERERE
RKRFEPPVMTERYITKPTRSITGPPPPVAMSSQTMGSSARGGGHGGHDRDDRNDRNDRMM
GNNQSSVSSMGGQSNSMQSSVGGMTGGMKGSAPPASQMSQQDGGNKYQGGNNSMIKRKPN
APLNQKMVRNTPPPNSGGGSSGMSQGGGVMSQGGNSAGGQKQIIYNTMPMQNPQQSQSSY
QPYTPAPMHGGPAPYRGPSKMNGDAGGRGGDGKPLPQRAMRQYSGSSSNSSMNYNNDNQN
QGRHTQHGPPHSGGQGGNSSSPPLQSGGPHGMSGPPSNQQPPPQPQRQMRSRENQLQDLR
QFGQDFQLANTSPSPGPPTQQQQSASISSQSQQHMNINKGHQPQPSVSPPQQQPPHMQQQ
QHVSGHPSQHVAMQHVPQQHHAGQPQQSQQSHHGGPPPQQQQHYVPPPHLQQQQQPHGPP
PHLQQQQQQNLPPPQQQQQTQKQMQHVPQQHGAGPASMPMQHVPPPQTPQQHVAPQTPQQ
HIMPEQTTQVTQTNTVGTSTQPQQPTTTQNVTPTGAGQTNSQQQQTSPPVAVDNNTPNQQ
QQQQQQQQQQQQTPITKTDAAGTPVSSSNSSSTPSDKTTPPSSNTSSSGTTGTTSSASSS
APLVKKTHVLNPSAKPFTPRSPSTPNPSRPHTPQTPVTMTTIYTQGAPLAAAGGQQTPIY
MMTGQQPATAFHAPGHPQAAQQPRMRRGNYGPMTPSQMHASAATGQPLLATGPLQTQFIS
YPQTPHAPHFQSQSYAPQMVRMYEPQQLQFLTQTPPSTTPSPGQPHQTFHPQPQPSPAGG
GPQPPFAPQTPASYHVVCPLTIHPSQLMPSHYYQAAAGQHPQQLLQPQLIMPQHPAQ
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacaataaacgtaaaaatcgccccagtggtggtggtggtggaggaggcggtata
tccactggtggtggtatctcaagatattcgaatgataacagacagccgaataataaatct
cgttcccaggctcagggcatttacaataatgcatattttatgcatgctgccactgctttg
gtcggcaatgttgtacaaatgcgtttacgttcgggtaatgtttatgaaggtgtctttcgt
acattctcacccaatttcgatgtggctttggaattgcctgcttgcattaagttgagtaaa
aattcacccgatgaatcgaaatcggtaccaaatgttatgatttttccctatgatacggta
gtgagcatttctgctaaagattttgattctcagtatgcaacaggtggtaatttccaaacg
gatgctgccatttcggagaaatgtaatggttcacgtttcgaagagaaagaactagaaccc
tgggatccttctggcataaatggcgaagttgacatcgtattagatgacgctaccaatggt
tgggatgccaatgacatgtttcgtaagaatgaaaatacttttggagttcagtcaactttt
gacgattctctgtcttcgtacactgtgcccttggataaaatcgattcagatgagtttaaa
gaacgtgaagctaaagctgaaaaattggcggctgaaattgagaataatccagcgtgtagg
gatcgtctcgatttagagaatggagacgaagaagcaatgtttgctgctgttgcacgtccc
gatttagagcgtgaacgggaacgcgagagagaacgtgaaagagaacgcgatttggagaga
gaaagagaacgggaacgtgagcgtgaacgcgaggaaagagaaagggagcgtgaaagagag
cgcaagcgttttgaaccacccgtaatgactgaacggtacataacaaaaccgacacgttcg
attaccggacctccaccacccgttgctatgtcctcacaaactatgggctcttcagctcgt
ggtggtggtcatggtggccatgatcgtgatgatcgtaatgatcgtaacgatcgcatgatg
ggcaacaatcaatcatctgtctcttcgatgggtggtcagtcaaactctatgcaatcatct
gtcggcggtatgacaggtggtatgaagggttctgctccacccgcttcccagatgtctcaa
caagatggtggcaacaaataccagggcggtaataattccatgataaaacgcaaacccaat
gcgcctcttaatcaaaaaatggtgcgcaatacaccaccacccaacagtggtggaggttca
tctggcatgtcccaaggaggaggtgtcatgtctcagggcggcaattccgctggaggtcaa
aagcaaatcatttacaatacaatgccaatgcaaaatccccaacaatctcaatcgtcttat
cagccttatacaccagctccaatgcacggtggtcccgctccctatagaggtccttcgaaa
atgaatggtgatgctggcggcagaggtggtgatggaaaaccgttgcctcaaagagctatg
cgtcagtattcgggttcttcatcgaactcctcgatgaactacaacaatgataatcaaaat
cagggtagacacacgcaacatggtccacctcatagcggaggacaaggtggtaacagcagt
tcaccgcccttacaatctggtggtccacatggcatgtctggtcctccctcaaaccaacag
ccaccacctcagccacaaaggcaaatgcgttctcgtgaaaatcaattacaggacctaaga
caatttggtcaagatttccaattggccaacacatcaccctctcccggtcccccaactcag
cagcagcagtctgcttccatttcttcacaatcacagcaacacatgaacattaataagggc
catcaaccacagccatcggtgtcgccgccccaacagcaaccaccccatatgcaacagcaa
caacatgttagtggtcatccatcgcaacatgttgctatgcagcatgtgccgcagcaacat
catgctggacaaccacagcagagccagcaatcgcatcatggaggaccaccaccacagcag
cagcaacactatgtgccaccaccacatttgcagcagcaacaacaaccccacggtccacca
ccacatttgcagcagcaacaacaacagaatttgccgccaccccaacaacagcaacagaca
caaaaacaaatgcaacatgtaccacaacaacatggcgcaggaccagcatcgatgccgatg
caacatgtgccaccaccacagactccacaacaacacgtggcaccacaaacaccacagcaa
cacatcatgcccgaacaaaccacacaggtaacacaaacaaatactgttggcacttcaacc
cagccccaacagcccacaacaacacaaaatgtaacaccaactggtgctggacaaaccaat
agccagcaacaacaaacttcaccacccgttgcggtcgataataacacacccaatcaacaa
caacaacaacagcagcagcaacaacaacaacagcaaacacccataacaaaaacagatgct
gccggtaccccggtatcgtcctcaaacagcagctctacaccatcagataaaacaacacca
ccctctagcaatacatcctcatcaggcacaaccggcacaacaagttcggcctcgagttca
gcaccactcgtcaaaaagacacatgtcctcaatccttcagctaagccttttacacctcgc
agtcccagcactccaaatccttcgcggcctcatacaccccaaactcccgtcactatgaca
accatttatacacaaggtgcgccattggctgcggctggtggtcaacagacaccgatctat
atgatgactggacaacaaccggctacagcttttcatgctcccggtcatccacaggctgcc
caacagccgcgcatgagaagaggaaactatggacccatgacaccatcacaaatgcatgct
tcagcggcaacaggtcaaccattattggccaccggaccattgcaaacacaattcatctca
tatccacaaacaccacatgcaccacatttccaatcgcagtcttatgctccacaaatggtc
cgtatgtatgaaccacaacagttgcaatttttaacacaaacaccaccatcaactacacca
tcacctggtcaaccacatcaaacgttccatccacagccacaaccttcccctgctggcggg
ggaccacagccaccatttgccccacaaaccccagcctcataccatgttgtgtgcccccta
acaatacatccctcacaattgatgcccagccactattatcaagcagcggcggggcaacat
ccacaacaattgcttcagcctcagctgataatgccacagcatccggcccagtag
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