Lucilia cuprina (Australian sheep blowfly): 111675448
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Entry
111675448 CDS
T06013
Name
(RefSeq) general transcription factor IIF subunit 1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
lcq
Lucilia cuprina (Australian sheep blowfly)
Pathway
lcq03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lcq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111675448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcq03021
]
111675448
Transcription machinery [BR:
lcq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
111675448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
DUF3874
Motif
Other DBs
NCBI-GeneID:
111675448
NCBI-ProteinID:
XP_023291981
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All DBs
Position
4:72955430..72957469
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AA seq
550 aa
AA seq
DB search
MSSGSKTAPSTSAGTSSNANAQASSAPTPPANVQEFNIRVPKNLRKKHHVMRFNATLNVD
FAQWRNVKLERENNMKEFKGAEEDMPKFGAGSEYNRDLREEVRRKKFGIIAKKYRPEAQP
WILKVGGKSGKKFKGIREGGVSENAAFYVFTHAPDGAIEAYPLNEWYNFQPIQRYKSLSA
EEAEQEFGRRKKVMNYFTLMLRKRLKGDEEEEKDPEEVKVKGAGKKPKELKISEMDEWID
SEEESDSDSDGEEKKKKEEDSDDDGKGKKGKKGKAAEKKKKKRDVDDEAFEESDDGDEEG
REMDYDTESSEDEPDPEAKLDKDMKSVAEEDALRKLLTSDEEDEEENKSDESDKDDEEKK
KKDKNKDENKDKKKTNKNKAKDEKKDSSSDFSSDSSDSEDDNKIKKKDNSKPMSNQNSRS
ATPTFNNDANKRKMNSMPSDLTASENSNSPVSTPAKRPKAEMSTPSLPSTFAGVVSSNSK
DDYGITEEAVRRYLMRKPMTATELLTKFKNKKTGVSSDRLVETMTQILKKINPVKQTIQG
KMYLSIKVNK
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccggctctaaaactgctccttcaacaagtgccgggacttcgtcaaatgccaac
gcacaagcatcatcagcaccaactcctccagccaatgttcaggaattcaatatacgtgta
ccgaaaaacttacgaaaaaaacatcatgttatgcgtttcaatgccaccttaaatgtagat
ttcgctcaatggcgtaatgttaagttggaacgtgaaaataatatgaaagagttcaagggt
gccgaagaagacatgcctaaatttggcgctggttccgagtacaatcgtgatctacgtgag
gaagtgcgacgaaaaaagttcggtataatagccaagaaatataggccggaagctcaacct
tggatcctgaaggtgggtgggaaaagtggcaaaaagttcaagggtatacgagaaggtggt
gttagtgaaaatgctgcattttatgtattcactcacgcgcccgatggcgctatcgaggca
tatccactgaatgaatggtataatttccaacctatacaacgttacaagtctctgtcggcc
gaggaagctgaacaggaatttggtcgacgcaaaaaggtaatgaactatttcacacttatg
ttgcgtaaacgtctaaagggtgacgaggaagaggaaaaagatcccgaagaggttaaagtt
aagggtgctggtaaaaaacccaaagaacttaaaattagtgaaatggatgagtggattgat
tcggaggaagaatccgattcggatagcgatggggaggagaaaaagaaaaaagaggaagac
agtgacgatgatggcaagggcaaaaagggtaaaaaaggcaaagctgcagaaaagaagaaa
aagaaacgtgatgtagacgatgaggcttttgaagaatcagatgatggtgatgaagaaggt
cgtgaaatggactacgatactgaatctagtgaagatgaacctgatccagaggcaaaatta
gacaaagacatgaaatcagtggctgaagaagatgctttgcgtaagctgttaacttcagat
gaagaagatgaggaagaaaataaatccgatgagtccgataaagatgatgaggagaagaaa
aagaaagataaaaacaaagacgaaaacaaagataaaaagaaaactaataaaaataaggcc
aaagatgaaaagaaagattcctctagtgactttagttctgatagcagtgactccgaagac
gataataaaatcaagaaaaaagacaattctaagcccatgagcaatcaaaattctcgctct
gccactcccacatttaacaatgatgccaacaaacgtaaaatgaatagcatgcctagtgat
cttaccgcttcggaaaatagtaatagtccggttagtacaccagctaaaaggcctaaagca
gaaatgtctacaccatcactgccatcaacatttgctggtgttgtttcatctaatagcaaa
gatgattatggcataactgaggaggcggtacgtcgctatcttatgcgtaaacctatgacg
gcaactgaattgttgacaaaattcaaaaataagaaaactggtgtatctagtgatcgtttg
gtcgagaccatgacacaaatattaaagaaaatcaatcctgttaaacagaccattcagggt
aaaatgtatttaagcattaaggttaacaaatag
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