Lucilia cuprina (Australian sheep blowfly): 111675727
Help
Entry
111675727 CDS
T06013
Name
(RefSeq) regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
lcq
Lucilia cuprina (Australian sheep blowfly)
Pathway
lcq03013
Nucleocytoplasmic transport
lcq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lcq00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111675727
03015 mRNA surveillance pathway
111675727
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcq03019
]
111675727
Messenger RNA biogenesis [BR:
lcq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
111675727
mRNA cycle factors
P-body specific factors
111675727
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
111675727
NCBI-ProteinID:
XP_023292311
LinkDB
All DBs
Position
3:complement(49083257..49087875)
Genome browser
AA seq
1179 aa
AA seq
DB search
MSNDIENNATATGQEENEAVIDPEELERQEREELNAFLTELKAKISAKSHLRYENTNFDL
PEESYFAKLDSSLKRNTAFVKKLKQFTAAQLDPLMKDMKGLNLSKYISEICSALSEAKIK
MTDVPAVVLLCSKLHQTYADFDNEFFEAWQKTLLLKPGEKISNPSKLRVDLRLFAELVSS
GVITSKQGLSLLGNVLTNVISQDKEDHSNFSIILSFCRHCGEEYAGLVPRKMINLAEKYD
NPEIPKSDFLPSDKQENLRKLLKDYFKNLCKHLLSEQAELKNMTNNLKKAMASKGEISTK
TKEKCELMQANFDKLLSSAQTLSDLLDEPLPELAMETEICNPGAVIENMMDDAALGELDP
WGDEETKSFYIDLPDLRQFLPNFSAPKVDPEQIEDTSEMTEEALDADIDNDIDLDDPPST
TSDPPNEKDQVDNDDVLGATEKLPDKIGNALMEVGRQSNQTPGSNKQQFAQFLKNLNNCV
NKELIDSAAIEFLLNYNTKNNRKKLTKSIFAVHRNRLDLLPFLSRFVAIVNLCNTDVALD
LSELLRKEFKWHIRMKNQLNIESKIKIVRFMGEMVKFGLLKKFDALSCLKVLLRDFQHHQ
IEMACAFIEVAGIYLYNCKDTRWLMNTFLDQMMRLKTATALDSRHAAQVENVFYLVKPPE
TVKQDVVLRPVIHEYIRHLIFEELNKQNVERCIKMLRRINWHDSTISNYVIKCLSKAYLL
RFPLIRCLADLLSGLSSYQEKAVTMVIDNVFEDIRAGLEIHSPKLAQRRIAMAKYLGELY
NYKLVESTNILNTLYSIISLGVSTEEGVISELDPPDSLFRLKLACVLLDTCGPYFTSSAS
KQKLDYFLVFFQHYYWFKKSNPIFSKVQDTHDLFPILVDHMYRDCLSNVRPKLKLYKNLE
QAKEAIKKLQDKLYPQLKELTEQLNTEDSSNLHPIPEDSEFDEAASDDSSSELDRRPRDE
RGDEEFNDEDDENTEDGTNQANTTDWTENEGMPEDDCKPVIRTKEDLEFEQMFEKMAQDS
YQERLKETVKPNTKDIPVPMMVRNNKKSYEQISSASVVAATSQTTPPPSNDVKTTNTAAI
PFVLMVRSGKGGKQQFKQFAAPSDSQLAINLKLQEEKIREEKEKVKRLTLNITDRIEEED
YQESLMQSQRGNQANLYARPNKPKFKHQKGAPDADLIFH
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatgatatagaaaacaatgccactgccaccggccaagaagaaaatgaagcagta
atagatcctgaagaattggaacgccaagaacgagaagaactaaatgccttcctaactgaa
ctgaaagctaaaatttcagctaaatctcatttgcgttatgaaaatactaattttgattta
cccgaagaatcatactttgccaaattggattcaagtctaaaacggaatacagcttttgtt
aagaaattgaaacaatttactgccgcacaattagatccactaatgaaagatatgaaaggc
ctaaacttaagcaaatatatttcggaaatatgttcagctttgtcggaagctaaaattaaa
atgaccgatgttccggcagtcgtattactgtgttctaaattgcatcaaacctatgcagat
ttcgataacgaattctttgaagcttggcaaaagacattgttgctgaaaccgggagaaaaa
atttcaaaccctagtaagctacgcgtagacttgcgtctatttgctgaacttgtaagttca
ggtgtaataaccagtaaacagggcttaagtctattgggcaatgtactgaccaatgtaatt
tcccaggacaaagaagatcacagtaacttctcgataatattatcattttgtcgccattgt
ggtgaggagtatgcgggtttagtacctaggaaaatgataaatttagctgaaaagtatgat
aatccagaaataccaaagtcagactttttaccttccgataaacaagagaatttaagaaaa
ctattaaaggattattttaagaacttgtgtaaacatttactttcggaacaagcagaactg
aagaacatgacgaataatcttaaaaaagctatggcttccaaaggtgaaatttctacaaaa
acaaaagagaaatgtgaactaatgcaagcaaactttgataaattactatcgtcggctcaa
actttgtcggatttattggatgaacctttacccgaattggctatggaaacagagatctgt
aatcctggtgcagttattgaaaatatgatggatgatgcagctcttggtgagctcgatcca
tggggtgatgaagaaacaaaaagtttctacatcgatctaccagatcttcggcaatttctg
ccaaatttttcggcaccaaaagtggatcctgaacaaatagaagacacatcagaaatgacc
gaagaagcattggatgctgacatagacaatgatatcgatttagatgatccaccctcaacc
acctcagatcccccaaatgaaaaagatcaagtagataatgatgatgttttgggagcaact
gaaaagttaccggataaaattggcaatgctttgatggaagtggggcgacaaagtaatcaa
acaccaggttccaataaacagcaattcgctcaatttttaaagaatttaaataattgtgtt
aataaggaactaatcgattcggctgccatagaatttcttttgaattataataccaaaaat
aatcgaaaaaagttaactaagtctatatttgccgtacatagaaatcgcttagatctttta
cccttcttatcacgttttgtggccattgtaaatctctgcaatactgacgttgctttggat
ttatcggaattactgcgaaaagaattcaaatggcacatacgcatgaaaaatcaattgaat
attgagtctaaaataaaaattgtgcgctttatgggtgaaatggttaaatttggcttactc
aagaaatttgatgctttaagctgtttaaaagttctactcagagattttcaacatcatcaa
attgaaatggcttgtgctttcattgaggtggccggtatttatttgtacaactgtaaagat
acccgctggctcatgaacacttttctcgatcaaatgatgcgtttaaaaactgctactgct
ctagactctaggcatgcagctcaggtggaaaatgtattctatttggttaaacctccagag
acggtgaaacaggatgtggttttaaggcctgttatacatgagtatataaggcatttaata
tttgaagagctaaataagcaaaatgtagagcgttgcattaaaatgttaagacgcattaat
tggcatgattccactattagtaactatgttattaaatgtctgtcaaaagcatatctattg
cgttttccacttattcgctgtctggctgatctactatcgggtttgagttcatatcaagag
aaagcggttactatggttatagacaatgtgttcgaggatataagagctggtttggagata
cattcacccaagttggcacaacgtcgtatagctatggccaagtatttgggtgaactttat
aactacaaactggtagaatctactaatattttaaatacattatactccattatttccttg
ggtgtttccactgaggagggagtgatttcggaattagatcctcccgatagtttgtttaga
ttgaagttagcttgtgtactattagacacttgtggtccttattttactagttctgctagc
aagcaaaaattggattactttttggtgttctttcaacattactattggtttaaaaaatca
aatccaatattttcaaaagtgcaagatacccatgacttatttcctatattagtggatcac
atgtatcgtgattgtttgtcgaatgttaggcctaaattaaaactttacaaaaatcttgaa
caggccaaggaagccattaaaaagttgcaagataaattatatccacagctcaaggaattg
acagaacaattgaatactgaagattcttccaatttacatcctataccggaggacagtgaa
tttgatgaggcagccagtgatgattcatcctcggaattagatagaagacctagagatgaa
cgcggcgatgaagaattcaacgatgaggatgatgaaaatactgaagatggtacaaatcaa
gcaaataccaccgattggactgaaaatgaaggtatgcctgaggatgactgtaaaccggtg
ataagaactaaagaagatttagaatttgagcaaatgtttgagaaaatggcccaggacagt
taccaggaacgtttaaaggaaacagttaaacctaatacaaaagatatacccgtacccatg
atggttagaaataataaaaaatcctacgaacaaatatcctcagcttccgtagttgctgct
acatctcaaacaactccaccacccagtaatgatgtaaaaacaactaatactgctgctata
ccatttgtgctgatggtacgtagcggtaagggtggtaaacagcagttcaaacagtttgct
gcaccttccgattctcagttggccataaatttaaaactgcaagaagaaaaaatacgcgag
gaaaaggagaaggtcaaacgtttaacgctcaacataaccgatcgcattgaagaggaagac
tatcaggagtctttaatgcaatcacaacgtggtaatcaagccaatctttacgctcgtccc
aataaaccaaaatttaaacatcaaaaaggtgcccccgatgctgatttaatatttcattga
DBGET
integrated database retrieval system
