Lucilia cuprina (Australian sheep blowfly): 111675827
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Entry
111675827 CDS
T06013
Name
(RefSeq) bromodomain-containing protein DDB_G0280777
KO
K14323
protein CASC3
Organism
lcq
Lucilia cuprina (Australian sheep blowfly)
Pathway
lcq03013
Nucleocytoplasmic transport
lcq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lcq00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111675827
03015 mRNA surveillance pathway
111675827
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcq03019
]
111675827
Messenger RNA biogenesis [BR:
lcq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111675827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
111675827
NCBI-ProteinID:
XP_023292436
LinkDB
All DBs
Position
4:22913492..22917803
Genome browser
AA seq
1007 aa
AA seq
DB search
MADVENVSGVPVAATTTAASTVTVTPTDIPTTQETFGKSISAGGGGTGSEVTAEGNQTLN
ELGTSPTQEKSSNSHPHDSEYDTASDLEGNEEYDDDDDDMDDSLTEDDDDEEDSEDETET
DDDEEEDDEGVDIDLQGQEKIDAEAQKKVDEDRSNPQYIPKRGTFYEHDDRTAEVEGEGV
AGEGQEVGESPVIITGGTGSVSGSKTSTTPTISTASKTMKKWQPASAVDRWSHDRFDPSE
QAPKSRTELVNAYGYDIRTEDAPPKARRRRRYGRGPSKYNRNWEDESAYLKTNNKERKPP
KPSDFPALNENSKPRRPRRTREEKENRMERRKREGKTGEGRAERSEKMGPSSRSHHNDDH
DHRGEPDRRERADRNNDAGFKQQNRQKSYNNRGQGQNQASVGRQAAMEFKQKNRQNYQNS
STGSSNMNSSNLSSRLEAQRQPQQNQQQTQNLVRKSANGSAGTKDHNQSMGHQNVQQSQQ
YDGYNNNKKKHLEQGYQPMQAAQHSNIASQQIHHQQQQSQQSPMPNHGMNRQNPQIQNKT
PQQPTSNLSQRLQQVQNRNDPSHVGSVQMHAMATQNQQQHQLMQQQAANIIMAGTQPNQQ
QPQNQNISQQPMEQRGPPKRYSSLRRSQHDAQHIADHQQQQLQQQMHMQQQQQQNSSMMI
PADQAMLQANLMQMYHQENLQAQMQALQVTQQPAVAKQPNYAAQGPQAQPQQPYPGATAS
PAAYYVATPDAYTAAATAAVTAQATQAAATYAAQQANPNYLAQQQTAAAAAAAAAASLVY
NNPNNAPQQSVAAATAYGPSAPVGVVTQPQAGAATTPGYQNYNTVGGTTYFVPPPTQTSS
RPVSLPQRRPTNAIPILPPSEKNKQQKSQDSKTDNDSKSSTNQQSSSNQPPIGSAENIDH
IIDNMFVQRPAFQPPPATTTTTTTTNNTTSKTPASTADATAAENSTTANITSQDNNALVT
TENINKSSNDTSNAPTAASSSSSTTNTTTTTTTTTESSNNNQISAQE
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgtagaaaatgtctcaggagtgcctgttgcagcaacaacaacagcagcgagc
acagtcacggttacaccaactgatatacctacaacacaggaaacatttggaaagtcaatt
agtgcaggaggaggtggtacgggaagtgaggttaccgctgaaggaaaccagactctgaat
gaattggggacatctcccacacaagagaaatctagcaattcacatcctcatgattcagag
tacgatacggccagtgatttggagggtaatgaggagtacgatgatgatgacgatgatatg
gatgatagtttaacggaagatgatgatgacgaagaagatagtgaagatgagacggaaacg
gacgatgatgaagaggaggatgacgaaggcgttgatatagatttgcagggtcaagaaaaa
attgatgctgaggctcaaaagaaagttgatgaagatcgcagtaatccccagtatattccc
aaaagaggtacgttttatgaacacgatgaccgtacggctgaagttgagggcgagggagtt
gctggggaaggtcaagaagttggtgaaagtccagtaattattactggtgggactggcagt
gtatctgggtcgaaaacatcgaccacacctacaatatcaacggcttctaaaaccatgaaa
aaatggcaaccagcttcggctgtagatcgttggtcacacgatcgttttgatccttcggag
caggctcctaagtctagaactgaactggtaaatgcctatggctacgatattcgcacagaa
gatgctccacctaaggctcgcagaagacgtcgttacggtcgtggacccagtaaatacaat
cgtaattgggaagacgaaagtgcctacttgaagacaaataataaagagcgtaaaccacca
aaaccgtcagatttcccagcattaaatgaaaattctaaaccaaggcgccctaggcgtacc
agagaggaaaaggaaaatcgtatggaaaggagaaaacgcgaaggaaaaaccggcgaggga
agagcggaaaggtctgagaaaatgggaccatcatcacgtagccatcataacgatgaccac
gatcataggggagaacctgaccgaagagaaagagctgacaggaataacgatgccggtttt
aagcaacaaaaccgtcaaaagtcatataataatcgcggacaaggacagaatcaggcttct
gtaggacgtcaagctgccatggaatttaaacagaaaaatagacaaaactatcaaaattct
tccaccggatcctccaacatgaattccagcaatttatccagtcgcttggaggcccaaagg
caaccccagcagaatcagcaacagactcaaaatttggtcagaaagtctgccaatggaagt
gctggtaccaaggatcacaatcaatctatgggacaccaaaacgttcagcagtctcagcaa
tacgatgggtataataacaataaaaagaaacatttggaacaaggttaccaacctatgcaa
gcagcacaacattcaaatattgcttcacaacaaattcatcatcaacaacaacagtcccaa
cagtcgcccatgcctaatcatggcatgaacagacaaaatcctcaaatacaaaacaagaca
ccacaacaaccaacatcaaatttatcacaacgtttgcagcaggttcaaaatcgcaatgat
cccagtcatgtaggcagtgtacaaatgcatgctatggctacccaaaatcagcagcaacat
caattaatgcagcagcaggcggcaaatataataatggctggaacacaaccaaatcagcaa
caaccacaaaaccagaatattagtcaacaaccaatggagcaaaggggaccacctaagaga
tattccagtctgagacgttctcagcatgatgctcagcatatagccgatcaccaacagcag
caactgcagcaacaaatgcatatgcaacaacagcagcagcaaaattcatctatgatgata
ccagctgatcaagccatgttacaagcgaatctcatgcaaatgtatcaccaagaaaaccta
caggctcaaatgcaagccttacaagttactcaacaacctgcagtagctaaacaaccaaac
tatgcagctcaaggacctcaagctcagccccaacagccgtacccaggcgcaacagcttcg
ccggctgcttactatgtagcaactcctgatgcttacacggccgcagccactgcagctgtt
acagcgcaagccacacaagcagctgctacatacgccgcccaacaagcaaatcccaattat
ttggctcaacaacaaactgctgctgcagcagctgcagcagcggcggccagtttagtttat
aataatcctaacaatgctccacaacagtcagtagctgctgctacagcttatggcccatcg
gccccagtgggagtggtaacacagccccaagctggtgctgctacgacacctggctaccaa
aactacaataccgtaggaggaactacttactttgtaccaccccctacacaaacatcctca
cgtcctgtctctctaccccaaagaagacctaccaatgctattcctatactgccaccttcc
gaaaagaacaagcaacaaaaatcacaagactccaaaaccgataatgattccaaatcgtca
acgaatcaacagtcgagctcaaatcaacctcccattggttcagctgaaaatatcgatcat
attatagacaacatgtttgttcagaggccagctttccagccaccaccggcaacaacgacg
acaacaacaactacaaacaatacaacatcaaaaactcccgcatcaactgcagatgccaca
gcagctgaaaattcgactaccgccaacattacgtcgcaggataacaatgcgctagtaaca
acagaaaatattaataaatcttctaatgatacatcaaatgctcccactgctgcatcatca
tcatcgtccacaactaatactacaacaactactaccaccaccactgaaagcagcaataat
aatcaaatatcagcacaagaatga
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