Lucilia cuprina (Australian sheep blowfly): 111676853
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Entry
111676853 CDS
T06013
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
lcq
Lucilia cuprina (Australian sheep blowfly)
Pathway
lcq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lcq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111676853
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcq03041
]
111676853
Spliceosome [BR:
lcq03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
111676853
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_Gbeta
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
PRP4
NBCH_WD40
Beta-prop_EML
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR41
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_HPS5
WD40_like
Nha1_C
Motif
Other DBs
NCBI-GeneID:
111676853
NCBI-ProteinID:
XP_023293613
LinkDB
All DBs
Position
5:66194823..66196940
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AA seq
532 aa
AA seq
DB search
MSDDDIQYVKRQRTLYYGSLEDAERKRMLAGATSNPTTVTQASQLEDIDSDEDYEEQKKH
GTTIAPPPTAAALANKIDDDYFDLETEISKDKVALLEEFERKKRARQINVSTDDAEIKRN
LRQLNEPICYFGEGPAERRRRLRELLASLGENAIKQKLAEEEERKQLQKEQETTWYHEGP
ETLRIARLWIADYSLPRARERLEKAKEALEVPSATRAGRMVELQKRLQSLAPHSSQVGDT
RPLGGCAFNHDSSLLMTSSWSGLCKVWRVPDCKLEQTLRGHTSYVGGVAFRPGVSFEEKN
VVAMASGGHDGAVKLWGFDSEESIADITGHMPHRVSKLNFHPSGRFLATACYDASWRLWD
LEQKTEVLHQEGHAKAVHCLSFQSDGSVIVTGGLDAFGRVWDLRTGRCIMFLEGHLGSIF
GADFSPNGYHIATGSQDNTCKIWDLRRRQSVYTIPAHVNLISDVKYQRDGGSFLVTCSYD
CTTKIWSNKTWQPLKTLQGHDGKVVSLDISPDSQFIATTSFDRTFKLWSHES
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgatgatatacaatatgttaagcggcaaagaacactttattatggttcatta
gaggacgccgaacgcaaacgtatgttggctggagcaacgtcaaatcctacgacagtaaca
caagcttcccaattggaagatatagactcggatgaagactatgaagagcagaaaaagcat
ggaacaactatagcgcctccacccactgccgccgccctagcaaataaaatcgacgatgac
tattttgatttggaaacggaaatatcgaaggataaagtagccttactagaggaatttgag
cgtaagaagcgagcaagacaaataaatgtgtctaccgatgatgcggagatcaaacgaaat
ttacgtcagctaaatgaacccatttgttatttcggcgaagggccggccgagcgcagaagg
cgtctcagagagttgttggccagtttgggagaaaacgctataaaacaaaagttagccgaa
gaagaagaacgaaagcaattgcaaaaggaacaggaaactacatggtatcacgaaggtcca
gaaactcttaggatagctagactatggatagccgattattcattgcctagagcgagagaa
cgtttagagaaagctaaagaagctctagaagtgccaagtgctaccagagccggtcgtatg
gtggaattacaaaaacgccttcaatctttagctccacattccagtcaggtgggtgatacc
cggccattgggcggttgtgctttcaatcatgattcgtctcttttgatgacatcatcctgg
tcgggtttatgtaaagtttggcgggtacccgattgcaagctggaacagactctacgcggt
catacaagttatgtgggaggagtagcttttcgtccgggggtttcatttgaagagaaaaac
gtggtagctatggcatccggtggtcatgacggtgctgtaaaattatggggttttgattct
gaagagtccattgctgacataacgggacatatgcctcatcgcgtatccaaattgaatttt
catccatctggccgatttttagccaccgcatgttatgatgcctcatggcgtttgtgggat
ttggagcaaaagactgaagtacttcatcaagagggacatgcaaaagctgtgcattgttta
agctttcaatcggatggtagtgttatagttaccggtggcctagatgctttcggcagagtt
tgggacttgcgaacaggtcgttgtataatgtttttggaaggacatttgggatctatattc
ggtgcggacttttcacctaatggctatcatattgctactggttcccaggacaatacatgt
aaaatatgggatctaagacgtcgtcaatcagtgtacacaataccggctcatgtcaatctt
atttccgatgtcaaatatcaacgtgatggtggtagttttcttgttacttgctcttacgat
tgcactactaaaatatggtctaataaaacgtggcagccactcaaaacacttcaaggtcat
gatggcaaagttgtttcattagatatatcgccagactcacagttcatagctacaacatca
tttgatcgcacatttaaattatggtcccacgaaagttaa
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