Lucilia cuprina (Australian sheep blowfly): 111676859
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Entry
111676859 CDS
T06013
Name
(RefSeq) enhancer of mRNA-decapping protein 4 homolog
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
lcq
Lucilia cuprina (Australian sheep blowfly)
Pathway
lcq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lcq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111676859
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcq03019
]
111676859
Messenger RNA biogenesis [BR:
lcq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111676859
mRNA degradation factors
5'-3' decay
Decapping complex
111676859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40_Prp19
Beta-prop_EML_2
WD40
Motif
Other DBs
NCBI-GeneID:
111676859
NCBI-ProteinID:
XP_023293621
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All DBs
Position
2:38074351..38080878
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AA seq
1404 aa
AA seq
DB search
MLVALLTVDAVLKKSLLRSFQRRGNSLEISQASIADPSTILTTNLHPQLCPFKKPKVKVS
FRLFNKQTMSTIGQQIPTAGVVPLSSNTMAENTDNIINNNTKIISFKSGDKQCCQEIKSK
HVKIIANPGTHDHGSSKVKLKNIVDYIWEVKNYPGHLIAVHIDEKYIAYAINVNNKVSRM
EGMVRVVNTAKGLRALIKGMSGEVLDLQFAHIEKEHILASIDANSLYVHRIVLQEGTLVC
NLILKIEDPLTNYSPKYDKISWCPFIELPGEDDEDSQLIVWARGSLFQCFNVNIVVADQG
MGKCQASDIKSGYLRHYDETKTITWVALSPDGSTLGVGSTDGVIRFYQVYIHDKDPRCLH
EWKPYNDKPVSSFFFLDNLTKNNSDTYWKFAITGADNNTEFKVWDCGTWNCLQTINFSCS
IEKPLRFIAELDRTSSYLVVSSLETRTCYVMQIINTSSCYPAIKEETSDSEEVVNKDNSG
SSVASGSTSQMTTPAVVYIKSISEFPLSSGILSFSIVDAAVRRYKCSNDNYMCEELDDYD
EETSSIYCVVVHMYIVQAKSMQECHILYQPSVPENSDVKSTMSSSDTSAVSRNNISNKVL
ESNASENNERTDDDDDVEVIRNESEVEELTRNIPLIKDEFSGNKQNALELLLDIASSSNV
SSTANIASSSAGSTVVAVAAAAAAAPSVIATENKADSRNPSPKVSTSNKNYPQLNLMTPD
AFTSTSSSNNERKTPENVSSEVLNTILMLAGVAGQNAAPVKPENINLLNLVNNKIIEDKE
QQKMQLKHHNLESQKNFMAIDRNPGRNIGENLASGGSSPSREVQEIMSLQEYDKSSYSGD
ELLEENNENATETDATGTEDINVTASDPTNTKLAQTNAATTNWPKVPDVPKVSNNKHSAE
LQNAANLISQAVNASSMSNLSNSHLAPTLGNTSNNSSNNNNNNNIVANNMNNVANDLSDI
NGKISELIDLVKMQSIQINSLQNEVSELKKANGNFKPKNMSEFGYKLEMQLSKLMEKYLI
RYETEHNRKLSTFLAGKDVQNRELRDSIMQIMNQYVLTQFGEMVSKVMTLEIQRQLGPML
AAKLDNMQQQIQLNVAQKLSAFDLMIKENIAQACKSKTIIDTFGKSVLVGVQGSLQAAFV
ESMSSTLIPAYEKSSQNMFKQLHEAFSVGIKEFMEQFDNYLQQLQPMHDSTEEILNKFSG
FRQHLDSILTKHRNGVQDVMLETRKDIKGLELLLSRQIQETIRSEVRKSFENQVAAIRSQ
ANTPAPMYGAKDTIRHLLLQGQINKAFHQALLANDLSLVEFTLKSADHNAVFTPDCCLEQ
KVLLSLIQQISADMSDHNELKQNYLAEALLAINPMDPITREHAPKVLQELFRNCQMFLIN
YPKSSQCSNVRMLMKAVQAYKDQF
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atgttagttgcgcttctaactgtagacgctgttttaaagaaatcattattgaggagtttt
caaaggcgtggcaattctctcgaaatttcacaggcttccattgctgatccatcaacaatc
ttaactacaaacctacacccgcagctgtgcccctttaaaaaaccaaaagtgaaagtttct
tttcgccttttcaataaacaaaccatgagtacaattggtcaacaaatcccaactgctgga
gtcgttccattgtcatcaaatactatggcagaaaatactgataatattataaataataat
actaaaataatatcttttaagtctggcgataaacaatgttgtcaggaaattaaaagtaaa
catgttaaaataatagctaatcctggcacacatgatcatggctcatcaaaggttaagttg
aagaacattgttgactacatatgggaagtgaaaaactatccaggacatttgattgctgtt
catattgatgagaagtatattgcatatgccataaatgtaaacaacaaagtatcgcgcatg
gaaggcatggttcgtgttgtcaatacggctaaaggcttgcgtgctttaattaagggaatg
tctggcgaagtactagatttacaatttgctcacattgaaaaagagcatatattggcatcg
attgatgcaaattcactgtatgtgcatcgaatcgtattgcaggaggggacattagtgtgc
aatttaattctaaagattgaggatccattgacaaattattctccaaaatatgataaaata
tcatggtgtccatttattgaactgccaggagaagatgacgaagatagtcaactgattgtt
tgggcacgtggatcattgtttcagtgtttcaatgttaatatagtcgttgctgatcagggg
atgggtaaatgtcaagcaagtgatataaaatcgggttatttgaggcattatgacgagacg
aaaacaattacttgggtggcgttatcaccggatggctccacattgggtgtaggcagtact
gatggtgttatacgcttctatcaagtgtatatccatgacaaggatcctcgttgtctccac
gaatggaaaccgtataatgataaaccagtatcatcatttttcttccttgacaacttaact
aaaaacaattcagatacctactggaaatttgcaataaccggggctgataataatacggag
tttaaagtttgggattgtggcacatggaattgtttgcaaacaataaattttagttgtagc
attgaaaagccattgcgtttcatagcggaattggatagaacttcgtcgtatttagttgtg
tccagcttagagacacgcacttgttatgtgatgcaaatcataaacacgagcagctgctat
ccggcaatcaaagaagaaacgtctgatagtgaggaagtagtcaataaagataacagcggt
agtagcgttgcttccggcagtacatcccagatgacaacgcccgctgtcgtttatatcaaa
agtatttccgaatttcctcttagttctggcatactctccttctccatagtcgatgctgct
gtaagacggtataagtgttcaaacgataattacatgtgtgaagaattagatgactacgat
gaagaaacttcgtctatttattgtgttgttgtccacatgtacattgtccaggcgaaaagc
atgcaagagtgtcatatattgtatcaaccaagtgtgccggagaattctgatgtaaagagt
accatgtcaagcagcgatactagtgccgtaagcagaaataatataagcaataaagttctg
gaatcaaacgcaagtgaaaataacgaacgaactgacgatgatgacgatgtagaggttata
cgtaacgaaagcgaggtagaagagctcacgcgtaatattcctctaattaaggatgagttt
tcaggaaacaaacaaaatgctttagaacttttgttagatattgcctcctcctccaacgta
tcttccacagctaatattgcttcaagttctgctgggtcgactgtggttgcagttgctgct
gctgccgctgcggcaccaagtgttattgctacggaaaataaagccgactcacgtaatcct
tctcctaaagtatcaacctcaaataagaattatccccaattaaatctcatgacgccggat
gcgttcacttccacatcatcgtccaacaatgagcgtaaaacccctgaaaatgtcagtagt
gaggttcttaatactattttgatgttggctggtgtagctggtcaaaatgcagcgcctgtt
aaacccgaaaatataaacctattgaatttggtcaacaataaaatcattgaagacaaagag
caacaaaaaatgcaactaaaacaccataatctagaatcgcaaaagaactttatggctatt
gacagaaatcctggtagaaatattggtgaaaatttggctagtggtggctcaagtccaagt
cgtgaagtgcaagagataatgtctttacaggagtatgataagagttcctatagtggagat
gagttgctagaggaaaacaatgaaaatgccaccgaaacagatgccacaggaacagaagat
attaatgtaacagcatcagatccaacaaacactaaattagcacaaacaaatgcagccacc
acaaattggcccaaagtacccgatgttcccaaagtatcgaataataaacactctgctgag
ttacaaaatgcagctaatctaatttctcaagctgttaatgcctcctccatgtcaaacctt
agcaatagtcatttggcaccaactctaggcaacacgagtaataatagcagcaacaacaat
aataacaacaatattgttgcaaataatatgaacaatgttgctaacgatttgagtgacata
aatggaaaaattagtgaactaattgatttggttaaaatgcaatcgatacaaattaatagt
ctacaaaatgaagtgtccgagctgaaaaaggcaaatggaaactttaaacccaaaaatatg
tctgaatttggctataaactggaaatgcagttatctaaactaatggagaaatatttgatc
cgttacgaaactgaacataaccgcaaattgtccacatttttagctggaaaagatgttcag
aatcgtgaattgcgtgacagtataatgcaaattatgaatcaatacgtgctgactcaattt
ggcgaaatggtgtccaaagtaatgactctggaaatacaacggcaattgggccctatgttg
gcagccaaactcgataatatgcagcagcaaatacaattgaatgtggcacaaaaactctca
gcattcgatttaatgattaaggagaatattgcacaagcctgcaagagcaaaacaattatc
gatacttttggcaagtcagtgttggttggagtacagggtagtttgcaggctgctttcgtg
gaatccatgtccagcacattaattcccgcctatgaaaaatcctcccaaaacatgttcaaa
caattacatgaagcattttccgtgggtataaaggaatttatggaacaatttgataattat
ttacaacaactgcagccaatgcatgattctacggaggaaattcttaataaattttctggt
tttcgacaacatttggattctattttaactaaacatcgcaacggcgtacaagatgttatg
ctggaaacacgtaaagatatcaagggattggaacttctactttcgcgacaaattcaagaa
accatacgatcggaggtgcgaaaatcttttgaaaatcaagtggcagccatacgatcacaa
gcgaatacacccgctcccatgtacggagccaaagataccattagacatcttttattgcag
ggacaaataaataaagcattccatcaagccctgctagccaatgacttaagtttggtggaa
ttcacactaaagagtgccgaccataatgccgtctttacacctgactgctgtttggaacaa
aaggttttgctctctttaatacagcaaatctcggccgatatgagcgatcacaatgaactc
aaacagaattatttggctgaagcgctattggccattaacccaatggatcctattacaaga
gaacatgcaccaaaagttttgcaagaacttttccgcaattgccaaatgtttcttattaac
taccccaagagttcacaatgcagcaatgtacgcatgcttatgaaagctgtgcaagcctac
aaagatcaattctaa
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