Lucilia cuprina (Australian sheep blowfly): 111677336
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Entry
111677336 CDS
T06013
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
lcq
Lucilia cuprina (Australian sheep blowfly)
Pathway
lcq03018
RNA degradation
lcq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lcq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111677336
09123 Folding, sorting and degradation
03018 RNA degradation
111677336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcq03019
]
111677336
03041 Spliceosome [BR:
lcq03041
]
111677336
Messenger RNA biogenesis [BR:
lcq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111677336
mRNA degradation factors
5'-3' decay
Lsm complex
111677336
Spliceosome [BR:
lcq03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
111677336
Complex C
U2 snRNP components
111677336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
DYW_deaminase
Motif
Other DBs
NCBI-GeneID:
111677336
NCBI-ProteinID:
XP_023294207
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All DBs
Position
5:complement(69008335..69012267)
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AA seq
95 aa
AA seq
DB search
MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNC
FIRGSVVRYVQLPGDEVDTQLLQDAARKEAVVSSR
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgttattctattcgtttttcaaatctttggttggcaaagatgtagttgtagaactaaaa
aatgatttaagtatttgtggaactttacatagtgtagatcaatatttgaacataaagtta
actgatattagtgtaaccgatccggagaaatatccgcacatgttgtcggtaaaaaattgt
tttatacgcggatccgttgtgcgttacgttcaactgcctggtgatgaagtggacacacaa
cttttgcaagatgccgcgcgcaaagaagcggttgttagttcacgatga
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