Lucilia cuprina (Australian sheep blowfly): 111677345
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Entry
111677345 CDS
T06013
Name
(RefSeq) ATP-dependent RNA helicase dbp2
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
lcq
Lucilia cuprina (Australian sheep blowfly)
Pathway
lcq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lcq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111677345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcq03041
]
111677345
03009 Ribosome biogenesis [BR:
lcq03009
]
111677345
Enzymes [BR:
lcq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111677345
Spliceosome [BR:
lcq03041
]
Complex A
U1 snRNP components
U1 related factors
111677345
Complex B
111677345
Ribosome biogenesis [BR:
lcq03009
]
Eukaryotic type
Pre-60S particles
Helicases
111677345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
Utp25_C
Motif
Other DBs
NCBI-GeneID:
111677345
NCBI-ProteinID:
XP_023294218
LinkDB
All DBs
Position
5:complement(68690397..68699354)
Genome browser
AA seq
685 aa
AA seq
DB search
MFENNQSNMQMSRPAGGGYRDQQQHRGGPMRHGHAGGGMQHKRPTPYGRPQNPQHRNNSS
KDQFEGGNANSNNTFASGDRLPNIIWSELTLTPFKKNFYKPCESVAARSQSEVDGYLSTN
EITLKGVSIPTPSIDFDEGGFPEYVMSGIKKMGFAKPTAIQAQGWPIALSGRDMVGVAQT
GSGKTLAYVLPAVVHINNQPRLEHGDGPIALILAPTRELAQQIQQVANEFGSQTHVRNTC
IFGGAPKHYQSRDLERGVEIVIATPGRLIDFLERGVTNLKRCTYLVLDEADRMLDMGFEP
QIRKIIKQIRPDRQVLMWSATWPKEVRNLAEEFLDNYIQINIGSLTLSANHNILQIVDVC
DENEKDFKLIKLLGEISSEKDTKTIIFVETKKRVDEITRTISRQGWRACAIHGDKSQQER
DYVLASFRNGRNAILVATDVAARGLDVDDVKFVINYDYPSNSEDYVHRIGRTGRSNNTGT
AYTLFTNSNANKANDLIQVLKEANQVINPRLVDMASSQSRRGGRNNSQGYKKMSSQQSYG
GNNNYQQRFNNRPNNNYGRPDQHQAQQHQRPAYSQYPPHHQQPQGSGGYPPRSQNPNTQM
TRSNGHQSRFSSAPPSHQAYDNSEEKKSRFGQAPPHQGGGYENYLPKNLAAGGYVQQPPL
PTAAYVVPTSSDMYAYPPPPLPVQN
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaataatcaatccaatatgcaaatgagccgtcccgccggcggtggttaccgt
gatcagcaacaacatcgtggtggtcctatgcgtcatggccacgctggtggtggtatgcaa
cataaacgaccaacaccttacggtcgtccccaaaatcctcaacatcgtaataattcgtct
aaagatcaattcgagggtggaaacgcaaattctaataatacatttgcatccggtgatcgt
ttgccaaacatcatctggtcggagctaacacttactccgttcaagaagaacttctataag
ccgtgtgaatcggtagcggctcgttcccagtctgaagtcgatggctatttatcgaccaat
gaaattacattaaaaggtgtaagcattccaacaccaagtattgatttcgacgaaggtggt
tttcccgagtatgttatgagtggcattaagaaaatgggctttgctaaaccaacagcaatt
caagcccagggttggccaatcgcacttagtgggagagacatggtgggtgtggctcaaacc
ggttcgggtaagacgttagcatatgtattgccagccgtggttcatattaacaatcaacca
cgtttggagcatggcgacggcccaattgctttgattctagcacccactcgtgaactagct
cagcaaatccagcaagttgcaaacgaattcggctcccagactcatgtacgcaatacgtgt
atatttggcggcgctccaaaacactatcaatctcgagatttggagcggggagtcgaaatc
gttattgcgactcctggaagattgattgattttcttgaacgtggtgttactaatttaaaa
cgttgcacctacttggtgttggacgaggccgatcgtatgttggacatgggtttcgaaccc
cagatccgtaaaattatcaaacaaattcgtcccgatcgtcaagtgctgatgtggtccgcc
acctggccaaaagaagttcgcaacttggccgaagagttcttagacaattacattcaaatc
aatattggttcattgaccttgtctgccaatcacaatattttgcaaattgtcgatgtgtgc
gatgaaaatgaaaaagatttcaaactgattaaactcttgggtgagatctcctctgagaag
gataccaaaactatcatattcgtggagacgaaaaagagagtcgatgaaatcactcgcaca
atttcgcgccaaggctggcgagcatgtgccattcatggtgacaagtctcaacaggaacgt
gactatgtcttggcttcattccgtaatggtcgcaatgccattctagtggctaccgatgta
gctgctcgtggcttagatgtcgatgatgttaaatttgtcatcaattatgattacccatct
aattcggaggattatgtacatcgtattggacgcacaggacgttcaaataatacgggaacg
gcatacactctctttacaaactccaatgccaacaaggctaatgatttgatacaggtcctc
aaggaagcaaatcaagtcataaatccccgtttggtggacatggcatcgtcacaatcacga
cgaggcggtcgtaacaactcacaaggatataagaaaatgtcatcccaacaatcgtacggc
ggcaataacaactatcaacagcgtttcaataaccgacccaacaacaactatggccgtccc
gatcagcatcaggcacaacaacaccaaagacctgcctattcacaatatcctccacatcat
cagcaaccacaaggcagtggtggttatcccccaagatctcaaaatcccaacacacaaatg
acccgctcaaatggtcatcaatcgcgtttctcatcagctcccccgtcccatcaagcgtac
gataatagtgaagagaaaaagtcacgctttggccaagcaccacctcatcaaggtggaggt
tatgaaaattacttacccaagaatttggctgctggcggctatgtacaacaacctcctcta
ccaacagctgcgtatgtcgttcccacatcctcggatatgtatgcgtatccaccacctcct
ttaccggttcagaactaa
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