Lucilia cuprina (Australian sheep blowfly): 111677582
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Entry
111677582 CDS
T06013
Name
(RefSeq) collagen alpha-1(IX) chain-like
KO
K08131
collagen type IX alpha
Organism
lcq
Lucilia cuprina (Australian sheep blowfly)
Pathway
lcq04512
ECM-receptor interaction
lcq04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lcq00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111677582
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
111677582
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lcq00535
]
111677582
Proteoglycans [BR:
lcq00535
]
Extracellular matrix (ECM) proteoglycans
Others
111677582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
YebF
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
111677582
NCBI-ProteinID:
XP_023294502
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Position
4:86869738..86879002
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AA seq
707 aa
AA seq
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MNLIVKSNLILSLVLLIKIFATESALAVPNAYAGQEYYDQDEDEDFVPISPCNVVRPGDP
DLTTYDIISSYRFDEYQYEYQGVQQIVGSTGYQQAYHVSEYSNMTIESSRAFPKGIPDEF
SFECTFRVPQPQPILEEWYLFELSDYEYHSQMNVKLLPQESAIEFSLPKYDGSIQTVTFE
ETEIFDRSWHKVMLGVGQDGVRLWVDCKPVPDKSGSLKAPLDVRGPIDATDGSFSVAKKC
HKQETVPIDLQWMIFSCDKDKPEHSNCEDIPQYARAPKGMIQYETTTFRNSYTPSSPSIW
EREEETTPNPLDLKFAEPTSPQPWIISSTPNYLIGKDLLACPEQCPRGPPGPPGPPGPRG
LTGAQGIMGVPGTPASSFGRYESAAVKGEKGEPGLVGLTGAPGIPGEPGRPGVPGEKGIV
GLPGPQGPPGFGARGLTGEPGLPGEKGERGLPGLDGANGEPGPVGPPGPPGPPGPASAVQ
TADYMPYPNPGMIGPMGPAGPPGPAGPPGPPGSPGPEVMNGRNMDEREIRDICMSVVRDY
ISEISASLVGPPGPPGKRGVGRPGPRGAQGLQGEPGVRGPQGERGYPGIPGNPGSTGDMG
PQGPPGEKGDRGEPGIGREGPMGPMGPPGPEGHGIDGIPGRPGDRGDAGRPGEPGVRGPP
GEPGSCPDCSAYQAAYAYPLLLAQQQQNNKGPQNYYNKGPPNYYNKG
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaatagtgaaatcaaatttaatattatcactagttctattaataaagatcttt
gcaacagaatctgctttagcggtaccaaatgcttatgctggtcaagagtactatgatcaa
gatgaagatgaagattttgtgcctataagtccttgtaatgttgtacgacctggtgatcca
gatttaaccacctatgatattatatcatcatatcgtttcgatgagtatcaatacgaatac
cagggagttcaacaaatagttggatcaactggttaccagcaggcttatcatgttagtgaa
tattctaatatgactattgaatcatcgcgtgcctttcccaagggaattcccgatgagttt
tcatttgagtgtacttttcgtgtgccgcaaccacaacccatacttgaggaatggtatctg
tttgaactgtccgactatgaatatcattcacaaatgaatgttaagctattgccacaagaa
agtgctatagaattttcgttgcccaaatatgatggttccatacagacagttacttttgaa
gagacagagatattcgatcgttcctggcataaagttatgttgggtgttggtcaagatggt
gtacgtttatgggtggattgcaagccagtgccagataaaagtggtagtttaaaagctccg
ctagatgtaagaggtcctattgatgccacagatggttccttttcggtggcaaaaaaatgc
cacaaacaagaaactgtgccaatcgatttgcaatggatgatattcagctgtgataaagat
aaaccagaacacagcaattgtgaagatataccacaatatgcacgtgcccctaagggtatg
attcaatatgaaacaacaactttccgcaacagctacacaccctcctcgcctagcatttgg
gagagggaagaagaaactaccccaaatcctttagatttgaaatttgcagaacccacctct
ccgcagccttggattataagtagtactccgaattatttaattggtaaagatcttttggct
tgtcccgaacagtgtccacgtggccctcctggaccaccaggtcctccgggtcctagaggt
ttgacaggagcacaaggaataatgggtgtgcccggtactcctgcctcatcatttggtcgt
tatgaatcggcagctgtgaaaggtgaaaagggtgaacctggtttagtgggtttaactgga
gctcctggcatacctggtgaacccggtcgacctggtgtacctggtgaaaagggtattgtg
ggtttgccaggaccacaaggtcctcccggctttggagccagaggtttaacaggtgaacca
ggtttgcctggtgaaaaaggcgaaagaggtctacctggcttagatggtgccaatggtgag
cctggccccgtgggacctcccggaccaccaggtcctcctggcccagcttctgctgtacaa
actgctgattacatgccttatcccaatccaggaatgatcggtcctatgggaccagccggg
cctcctggtccagcaggacctcccggccctccaggttcaccaggaccagaagtaatgaat
ggtcgtaatatggatgaaagagaaattcgggatatttgtatgtctgttgttagagattac
attagtgaaatatctgcttcattggtaggacctccaggaccacctggtaaaagaggagta
ggacgtcctggtccaagaggagctcagggattgcagggtgaaccgggagttcgcggacct
cagggtgaacgtggttatcccggtatacctggaaatcctggatctactggtgatatgggt
ccgcaaggaccacctggtgaaaagggtgatagaggagaaccaggcattggtagagaaggt
cccatgggacctatgggtccacctggtcctgaaggccatggtattgatggtatacctggt
agaccaggcgatcgtggtgatgcgggaagaccaggtgaacctggtgtaagaggacctcct
ggtgaacccggctcttgtcccgattgttcggcttatcaggctgcttacgcttatccattg
cttttggctcaacagcaacaaaacaataaaggaccacaaaattactacaataaaggacca
cctaattattataataagggataa
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