Lucilia cuprina (Australian sheep blowfly): 111677682
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Entry
111677682 CDS
T06013
Name
(RefSeq) DNA mismatch repair protein spellchecker 1
KO
K08735
DNA mismatch repair protein MSH2
Organism
lcq
Lucilia cuprina (Australian sheep blowfly)
Pathway
lcq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lcq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
111677682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcq03400
]
111677682
DNA repair and recombination proteins [BR:
lcq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
111677682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
GCP_C_terminal
AAA_29
AAA_23
Motif
Other DBs
NCBI-GeneID:
111677682
NCBI-ProteinID:
XP_046808852
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All DBs
Position
2:63498831..63501795
Genome browser
AA seq
768 aa
AA seq
DB search
MEAINANKQEPQLNLDTNARRNFVKFLQKQGEKPVTTVRFFDRTDSYSVHGPEDSDLISR
LVYKSTAYIRQLLADDGQPTPYVMLSKTNFELAVRELLLVRNYRVEVYVRRSTGGEWQLE
YRGSPGNLLQFEDILFSNKEILVGNSILSLQLRVQNNQRNVGVASVDQNDCLFQVLEFLD
DDFFTELEATVVLLGPKECLLPQQDGEYEAVKNLLERNGIMVTVPPKSANTEKNDLIQDL
NHLLRFAKGQQEDATGMPELQLNIAMEALRVAIKYTDLVNDAGNLGHYQIKQLNLKRFVH
LDAAAVSALNILPKPGTHFSSPSYRWQSVLGVLDHCRTAQGHRLMAQWVKQPLRSQEILN
DRHNIVQCFLESPTTLNSLHEEFLKRIPDVLMLTKKLLRQKANLQDIFRIYQVMLRTPKI
VNALLALENATVKSVLCDPLKSYLEDLSGLKQMVEQVMDFDAIETGEYLVKASFDSELLE
MKERMSKLLHKMEKLQEKAGQELDLDKNQNVKLLNVSHVGYHFRITLRDDSVLRKNKNYK
IIDVVKGGIRFTSEKLTEINDEFVTLRTRYEEQQKNIVEEIVKVAVGYAAPLTSLNNEFA
QLDCLVSFAIAAQTAPTPYIRPKILPEGAGELVLKDIRHPCLELQEHITFIANNVEFRKD
KCNMFIITGPNMGGKSTYIRSVGTAVLMAHVGSFVPCSEATISMVDSILGRVGASDNIIK
GLSTFMVEMIETSGIIRSATDKSLVIIDELGRGTSTYEGCGIAWSIAE
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggaagctattaatgctaataaacaagaaccgcaacttaatttagacactaatgcccgc
cgaaattttgtaaaatttttacaaaaacagggtgaaaaacctgtcactaccgtgcgtttt
ttcgatcgcactgattcctattccgttcacggccccgaagattccgacttaatttctcgt
ttagtttataaatctaccgcctatataagacagcttttagctgatgatggacagcctaca
ccctatgttatgctttcgaagacaaatttcgaattggccgttcgagagttattgctagtg
cgtaattatcgtgtagaagtctatgtacgccgttctacgggcggtgagtggcagttagag
tatcgcggttcgccgggtaatcttctgcagttcgaggatattctcttctccaataaggag
atattggtgggcaatagcattttgtctttgcaattgcgtgtgcaaaataatcagcgtaat
gtgggtgtagcttcggtggatcagaatgattgtctttttcaagtgttggagtttctggac
gatgattttttcactgaattggaagctacggtggtgctattgggtcccaaggagtgtttg
ctgcctcaacaggatggagagtatgaagctgttaaaaatctcttagaacgtaatggcatt
atggttacggtgccaccaaaatctgccaacaccgagaaaaatgatttaatacaagatctt
aatcatttactacgttttgccaaaggtcaacaagaagatgccaccggtatgcctgaacta
cagcttaacatagccatggaggcgttaagagtagccataaagtatacagaccttgtcaat
gatgccggaaatttgggtcactatcaaataaaacaattaaatctgaaaagatttgttcat
ttagatgcagcagccgttagtgcccttaatatactgcccaaaccaggtacacatttttcc
tcaccctcctataggtggcaaagtgttttaggagtacttgatcattgtcgcactgcacaa
ggtcatcgtttaatggctcaatgggttaagcaacctttaagaagtcaggaaatattaaat
gatcgtcataatattgtacaatgtttcctcgaatcacccaccaccctaaattctttgcat
gaagaattcctaaaacgtatacccgacgtattaatgctcaccaaaaagttattacgtcaa
aaggccaatttacaagatatctttcgcatttaccaggtcatgttgcgtacaccgaaaatt
gtaaatgctctactcgctttggaaaatgccaccgttaaaagtgttttatgtgatcccctc
aaaagttatctagaagatctatcgggactcaaacaaatggtagaacaagtaatggacttt
gatgccatagaaacgggtgaatatttggtaaaagcttcctttgattcggaactactcgaa
atgaaagaaagaatgtccaagttactgcacaaaatggaaaagcttcaagaaaaggctggc
caagagttagatttggataaaaatcaaaatgtaaaactattaaatgtctcacatgtcggt
tatcattttcgcattaccctaagagatgatagtgtattgcgtaagaataaaaactataaa
ataattgatgttgttaagggtggcatacgttttacgtcggaaaaattaaccgaaattaat
gatgaatttgttacgttacgcacgcgctacgaagagcaacagaaaaatattgtggaggaa
atcgttaaggtagctgtaggttatgctgctcccttgacaagtcttaacaatgaatttgct
caattggattgtttggttagttttgccatagctgctcaaacggctcccacaccctatata
agacccaagattttgccagaaggtgccggagaattggtgttaaaagatattcgtcatcct
tgtctggaattgcaagagcatattaccttcatagccaataatgtggagtttagaaaagat
aaatgtaatatgtttattattactggtcccaatatgggtggcaaatccacctatatacgt
tcggtgggtacggccgttttaatggctcatgttggctcgtttgttccttgttcagaggcc
actatatctatggttgattccatattgggtcgtgtgggtgccagtgataatattattaag
ggtttgagtacttttatggtggaaatgattgaaacttcaggtattataaggtctgccacc
gataagtcgttggtcattattgatgaattgggtagaggtacttctacctatgagggttgc
ggtatagcctggtctatagcagagtaa
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