Lucilia cuprina (Australian sheep blowfly): 111678238
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Entry
111678238 CDS
T06013
Name
(RefSeq) regulator of gene activity isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
lcq
Lucilia cuprina (Australian sheep blowfly)
Pathway
lcq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lcq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111678238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcq03019
]
111678238
Messenger RNA biogenesis [BR:
lcq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111678238
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
111678238
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
VPS13_N
FAM171A1-2-B_C
Motif
Other DBs
NCBI-GeneID:
111678238
NCBI-ProteinID:
XP_023295285
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Position
4:85764343..85768897
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AA seq
569 aa
AA seq
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MANLNFQQPPRSIANASLTGRTTGGFGGSSLSGHVTPTSGMFPSGANYGQTQPQLSPNRS
AQLSVGGPALTSGNRANVFNQRPYVERRMQGLGQGPMSNMGNFMQNRGGYGTTGSGGGGG
GAAGGPLNNFHNVFGGSGDTTTPALLDPSEFPSLTNARGQNDQSLPQTNPLQPPGSKPYG
NFFTSFGMVKQPTSEQSEFTMSNEDFPALPGTQNSDGTTNAGSALTDSNNLDGTDKTMNS
IVANSGLGAVGSGAVGSGSSVGGGGGVVGGGSSGQGGVGVVGGGVGGAPVSTAGGNFGSG
IGGIVSSGGVSSSAPSGSGTTSGISGMGNSGSIEQQQQQQQQQQQQQQQQHPNDNSSDNK
LMKTGVQTSPDGKVTNIPASMVNNQFGMVGLLTFMRAAESDPNLVTLASGIDLTGLGLNL
NSQESLHPTFAGPFADHPCRAQDVECNVPPEYLINFAIRDKLSSPHLKKLQEDLLFFLFY
TNIGDIMQLMAAAELHSREWRYHIEEKIWITRIPGPNQYEKNGTKERGTFYYFDAQSWKR
LSKVFQIDPEKLDKCPNISAFMNINGQSV
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatttaaattttcaacaacccccaagaagcatagcaaatgcatctctaacgggc
agaactacaggcggttttggtggtagttcattatccggtcatgtaacacccacgtcaggc
atgtttcccagtggagcaaattatggacaaacgcaacctcaattatcaccgaatcgtagt
gctcagctatcggttggtggtcctgcgttaacaagtggtaatcgtgcaaatgtttttaac
cagcgtccatatgtggaaagacgtatgcagggactgggtcaggggcctatgtcgaacatg
ggcaattttatgcaaaatcgtggcggttacggtacgactggtagtggtggaggtggtggc
ggtgccgctggtggacctctaaataatttccataatgtttttggtggcagtggggataca
acaacgccggccctactcgatccttcagaatttccatctctgacaaatgctcgcggccag
aatgatcaatcactgcctcagacgaatcccctccagccgccgggaagcaaaccttatggt
aatttctttacctcttttggcatggtaaaacaaccaacatcagagcaatcggaattcacg
atgtctaatgaagatttccctgcgttaccgggcactcaaaactcggatggcacaacgaat
gcgggaagtgctctaacagatagtaataatttggatggtacggataagacaatgaattca
attgtagccaacagtgggttgggagctgtgggtagtggtgcggtaggatcaggctcatca
gttggtggtggtggtggtgtcgttggtggtggtagtagtggacaaggaggtgttggtgta
gttggtggtggtgttggtggagcgcctgtcagtacagcaggtggcaattttggcagtggt
attggtggtattgttagctctggtggtgtgagtagttcggcacccagtggtagtggtaca
acatctggcattagtggtatgggtaatagtggtagcattgaacaacaacaacagcaacag
cagcaacaacaacaacagcaacaacaacaacatccgaatgataattccagcgataacaaa
ttgatgaaaaccggcgtgcaaacatctcctgatggcaaagtcacaaatataccggcgagt
atggtgaacaatcaatttggtatggtgggcttattaacgtttatgcgtgccgctgaatcc
gatccaaatttggttacattagcctcaggcattgatttaactggtttaggtttaaatctc
aattcccaagaaagtttacatccaacattcgctggaccgtttgcggatcatccctgcaga
gcacaagatgttgagtgtaatgtgccacctgaatatttgataaattttgcgataagagac
aaactttcctcgccacatttaaaaaaactgcaagaagatctgctttttttcctgttctat
acaaatatcggcgatatcatgcaacttatggcagcagcagaattacatagtcgcgaatgg
agatatcatatagaggaaaaaatctggataactcgaattcctggccccaatcaatacgag
aaaaatggtacaaaagaacgtggcaccttttactatttcgatgcgcaaagttggaaacgt
ttgtccaaggttttccaaatcgatcccgagaaattagataaatgccccaatataagtgcg
tttatgaacataaatggacagtctgtataa
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