Lucilia cuprina (Australian sheep blowfly): 111678494
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Entry
111678494 CDS
T06013
Name
(RefSeq) splicing factor 3B subunit 3 isoform X1
KO
K12830
splicing factor 3B subunit 3
Organism
lcq
Lucilia cuprina (Australian sheep blowfly)
Pathway
lcq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lcq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111678494
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcq03021
]
111678494
03041 Spliceosome [BR:
lcq03041
]
111678494
03036 Chromosome and associated proteins [BR:
lcq03036
]
111678494
Transcription machinery [BR:
lcq03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
111678494
Spliceosome [BR:
lcq03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
111678494
Complex B
111678494
Complex C
U2 SnRNP specific factors
111678494
Chromosome and associated proteins [BR:
lcq03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
111678494
TFTC complex
111678494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
111678494
NCBI-ProteinID:
XP_023295633
LinkDB
All DBs
Position
5:55532784..55540727
Genome browser
AA seq
1226 aa
AA seq
DB search
MYLYNLTLQKATGITHAVHGNFSGSKQQEVLLSRGKSLELVRPDSNTGKVHTVLSTEVFG
CIRSLMSFRLTGGTKDYIVVGSDSGRIVILEYNPTKNCLDKVHQETFGKSGCRRIVPGQY
LAIDPKGRAVMIGAVEKQKLAYILNRDAQARLTISSPLEAHKSNTFTYHMVGVDVGFDNP
MFACLEIDYEEADNDPSGDAAERTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLISVPG
GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFICSATHRTKSMYF
FLVQTEQGDIFKVTLETDDDVVSEIKLKYFDTVPPAVSMCVLKTGFLFVACEFGNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGETFFFAPRPLKNLVMVDEMPSFSPIISSQVADLANEDT
PQLYVLCGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRVDDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLCCASLGEDALVQVYPDGIRHIRSDKRVNEWRAPG
KKSITKCAVNQRQVVITLSGRELVYFEMDATGELNEYTERSEMPAEIMCMALGTVPEGEQ
RSWFLAVGLSDNTVRIISLDPNDCLTPCSMQALPSPAESLCLVEMGHTESSSSANDETNE
RSNVPSKGGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIRMQGSEAV
LAMSSRSWLSYYYQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRILALEKLGA
VFNQVSFGLEYTPRTFVIHPDTGRMIIAETDHNAYTEETKNARKQQMAEEMRMAAGEEER
ELANEMANAFINEVLPEDIFSAPKAGVGLWASQIRALDPTHGQTLFKIPLTQNEAIMSMA
ILKFSVAQDGRYYLAVGIAKELLLNPRITNGGFIDIYKIDPTCSQLDFLHRTELEEVPGA
LCGFQGRLLAGCGRILRIYDLGKKKLLRKCENKHIPYQIVNIQAMGHRVYASDVQESIFF
IRYKRAENQLIIFADDTHPRWVTATTLLDYDTIAIGDKFGNMSIQRLPHSVTDDVDEDPT
GTKSLWDRGLLSGASQKAENISTFHVGEILMSLQKSTLIPGGSEAMIYTTLSGTVGAFVP
FTSREDFDFFQHLEMHMRNENPPLCGRDHLSYRSAYYPVKNVIDGDLCEQYLSIDPAKQK
SIAADMFRTPNQVCKKLEDIRTRYAF
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atgtatttgtataatctgaccctacaaaaagccaccggcattacgcatgctgtacatggt
aatttttccggcagcaaacagcaagaagttttattatcacgtggcaagtcgctagaactt
gttaggcctgactcgaatactggcaaagtacatactgtactctccactgaggtatttggc
tgcattagatctttgatgtcattccgtttgactggtggcactaaagattatattgtggtg
ggctctgattctggacgcattgttattttggaatataatccaacgaaaaactgtttggat
aaggttcatcaggaaacctttggtaaatccggttgccgtcgcattgttcctggccaatat
ttggccatagatcccaaaggacgtgctgttatgattggtgcagtagaaaaacaaaaacta
gcctatatactcaatcgtgatgcccaagcacgtttaaccatttcttcgccattagaagct
cataaatcaaatacttttacctatcatatggtgggagttgatgtaggttttgataatcct
atgtttgcttgtttggaaattgattatgaagaggccgataatgatccttcaggcgatgct
gctgaacgtacccagcaaactcttacattctacgaattggatttgggtctaaatcatgtt
gtacgtaaatactcagaaccattagaagaacatgcaaattttcttatatcagtaccaggc
ggcaatgatggtccctctggcgtattaatttgttctgaaaactatttaacatacaaaaat
ttaggtgatcaacatgatatacgttgtcccataccacgcagacgtaatgatttagatgat
ccagaacgtggcatgattttcatatgttccgcaacacatcgtacaaaaagcatgtatttc
tttttggtacaaaccgaacagggtgatatatttaaagtaacactagaaactgatgatgat
gtggtatcagaaattaaattaaaatattttgataccgtacctccagctgtatctatgtgt
gttttaaagacgggtttcttgtttgttgcatgtgaatttggcaaccattatctttatcaa
attgcccatttgggtgatgatgacgatgaaccagaatttagttcagccatgcctttagag
gaaggtgaaacatttttctttgctcctcgacctttaaagaatttagttatggttgatgaa
atgccctcattttcacccattatatcatcacaagttgctgatttggccaatgaagataca
ccacaattatatgttttatgtggtcgtggtcctagatcttctttgcgtgtgctacgtcat
ggcttagaagtatctgaaatggctgtttctgaactacctggtaatccaaatgccgtatgg
actgttaaaaaacgtgttgatgatgaatttgatgcctatattatagtatcctttgtaaat
gctacattggtattgagtattggtgagacagtagaggaagtaacagatagtggttttctg
ggtactacacccactttatgttgtgcttcattgggtgaagatgctcttgtgcaagtatat
ccagatggtatacgtcatatacgttcggataaacgtgttaatgaatggcgtgctcccggc
aaaaaatctataaccaaatgtgccgtcaatcaacggcaggtggtgataacactgtcgggt
cgtgaattggtgtattttgaaatggatgctacgggtgaactaaatgaatacactgaacgc
tctgaaatgcccgccgaaataatgtgcatggctttgggtactgtaccggaaggtgaacaa
cgttcttggttcttagctgttggtttatctgacaatactgtgcgcattatatctttagat
cctaatgattgtttaactccctgctctatgcaagctttaccatcaccagctgaatctcta
tgcttagtagaaatgggacacactgaaagttcatccagtgccaatgatgaaaccaatgaa
cgttcaaatgtaccttcaaagggaggcaccatatatctcaatataggtcttagcaatggt
gttttattgcgtacagttttggatccagtttcgggagatttggctgatacacgtacacgt
tatttgggttccagacctgtaaaacttttccgcatacgcatgcagggctcagaagcagta
ttggccatgtctagtcgttcctggttatcttactattatcaaaatcgtttccatttaaca
cctctatcctatgagactttggaatatgcctcaggtttttcaagtgaacaatgtagtgaa
ggtattgtggccatttcaacaaatacactgcgtattttggctttagaaaagctgggagct
gtttttaaccaagtttcctttggtttggaatatacccctcgaacgtttgtcatacatccc
gatactggacgcatgattatagccgaaacagatcataatgcttatacggaagagactaag
aatgcccgtaaacagcaaatggccgaagaaatgcgcatggcagctggtgaggaggaacgt
gaattggccaatgaaatggcaaatgcttttataaatgaagtcttacccgaagatatattt
tctgctccaaaagctggtgttggcctgtgggcttcacaaatacgtgcattagatcccaca
catggacaaaccctattcaaaattcccttaacacaaaatgaggccattatgtctatggct
attttgaagttttcggtggctcaagatggacgttactatctagcagtgggtatagctaag
gaactattgttaaatcctcgcattacaaatggaggttttatagatatttacaaaattgat
cctacatgttctcaattggatttcttgcatcgtactgaattggaggaagtgccgggcgct
ctttgcggtttccagggtcgtctattggccggttgtggtcgtattttgcgtatttatgat
ttgggcaagaaaaaacttttgcgtaaatgtgaaaataaacatataccctatcaaatagtc
aatatacaagccatgggtcatcgtgtttatgcctcagatgttcaagaatctatattcttt
atacgctataaaagagctgaaaatcaattgatcatttttgccgatgacacacatcccaga
tgggtaacagctactacattattggattatgataccatagcaattggtgataaatttggc
aatatgagcatacaacgtttaccacattccgtaacagatgatgtcgatgaagatcctaca
ggcacaaaatctttatgggatcgtggtctactttcgggtgcttcacaaaaagctgaaaac
atttccaccttccatgtaggtgagattcttatgtcgctgcagaaatcaacacttataccg
ggtggttcagaggccatgatttataccactcttagtggtacagttggagcatttgtaccc
tttacaagtcgtgaagatttcgatttctttcaacatctcgaaatgcatatgcgcaatgag
aatccaccattgtgtggtcgtgatcatctcagttatcgtagtgcttattatccagttaaa
aatgttatcgatggtgatctatgcgaacagtatttatcaatagatccggctaaacaaaag
tctatagcggcggatatgttccgtacgccaaatcaagtttgcaaaaaattggaagatatt
agaacgcgttatgccttctaa
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integrated database retrieval system
