Lucilia cuprina (Australian sheep blowfly): 111679244
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Entry
111679244 CDS
T06013
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
lcq
Lucilia cuprina (Australian sheep blowfly)
Pathway
lcq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lcq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111679244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcq03019
]
111679244
Messenger RNA biogenesis [BR:
lcq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111679244
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
111679244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
RTC_insert
DUF5646
A2M_bMG2
Motif
Other DBs
NCBI-GeneID:
111679244
NCBI-ProteinID:
XP_023296540
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All DBs
Position
2:complement(68722361..68731888)
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AA seq
940 aa
AA seq
DB search
MAATRKLQGEIDRCLKKVAEGVETFEDIWKKVHNATNSNQKVIEKYEADLKKEIKKLQRL
RDQIKSWIASAEIKDKSALLENRRLIETQMERFKIVERETKTKAYSKEGLGAAQKMDPAQ
RIKDEARNWLTNSISSLLIQIDQYESEIESLLAGKKKRLDRDKQDRMDELRSKLDRHKFH
VTKLETLLRLLDNDNVEAEQVNKIKDDVEYYIDSSQEPDFEENEFIYDDIIGIDVDVEYS
GTGVSLGIPSSATTDSNNSNETSGSPSSITSGGSPVQSPLPAQQQQMQQQASNTSGSGSA
TQQQQINLNYSSDSTAADGTAKDKHNKNESNANSKTKQPVKPTAVRANNKTSSGSTDVPT
SKIISSTPSKNHHQPQTQHEHHPTQQQQQQQQQTAAAVVAAATASSAASGNHTSNNINTS
GAPTLAAAVAAAAAAASTVTVHNNPAVQQHAPAPTLQGNPSIASVTASSANSNNNSTQQI
QGQSVIQATPTIAFSAVAKHNTSHLENGPVHGGASYAIVGGSQQQQLSNLQANSSHLQNA
HNTSNNSTVGSIANVVQQGANPANVNNLAASAVNCISPNGIAGLQQALNAQQQVLGMGAN
NNNNNNARASPGLLSPKHMNGLPVTSVANNTSSVDAISLKTMAQEAINRSVIDTNNLSQQ
QASSLDNRQQQQQQQVLQQHFSSDTTANTHQQQQQQQQTNTTAGLVAAVTASTNGPTTLG
GNSAGNNGGNVGPIGSNINASALTNAAGQQPIGAGASSAGNKQQQQLSQQQQQPTNEAHI
PPLLGVAPLGPSPLQKDHQLQFQMMEAAYYHLPTPSDSEKLTTYFHRTPVQTPAHYPQQQ
LPIYDTVEFYQRLSTETLFFVFYYMEGSKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPK
IINDDYEQGTYIYFDYEKWSQRKKEGFTFEYKYLEDKELN
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacgagaaagttgcaaggagaaattgatcgatgtctgaaaaaagtagctgag
ggagtggaaacgtttgaggatatatggaaaaaagtacacaatgccacaaatagcaatcag
aaagtaattgaaaaatatgaggccgatctcaaaaaggaaatcaaaaagttgcaacggctt
cgcgatcagattaaatcatggattgcatcggctgaaatcaaagataaaagtgcactcttg
gaaaatcgtaggctaatagaaacgcaaatggaacgctttaaaatagttgaacgagaaacg
aaaactaaagcgtattccaaagaaggtttgggtgctgcacaaaaaatggatcctgctcaa
cgtattaaagatgaagcccgcaattggttaacgaactccattagttcactgctaatacaa
attgatcagtatgaaagtgaaatcgaatcattgctggcgggtaagaaaaaacgtttagat
cgtgataaacaggatcgtatggatgaattaagatcaaaattagatcgtcataaattccat
gtaaccaaactagaaacattattacgtctactcgacaacgataatgttgaggccgaacaa
gtaaataaaatcaaagatgatgttgaatattatattgattcatcacaagagccggacttt
gaagaaaatgaattcatttatgatgacattattggcattgatgtcgatgtcgaatattcg
ggtacaggtgtctcacttggtattccatcatcagcaactacagacagtaataatagtaat
gaaaccagcggctcaccaagtagtataacatcaggcggtagtcctgtacaatctccattg
ccggctcagcaacaacaaatgcagcagcaagcctcaaatactagtggcagtggttcggca
acgcagcaacagcaaattaatttgaattattcaagcgattctacagcggcagatggtacg
gccaaggataagcataataagaatgaaagtaatgccaatagtaaaacaaagcaacctgtt
aaacctacagcggtacgagcgaataataaaacatctagtggttcaacagatgtccccacg
agtaaaattattagttcaacacctagtaaaaatcaccatcagccccaaacgcagcatgaa
catcatcctacacaacagcagcagcagcaacaacaacagacggcagcagcagttgtggcg
gccgcaacagcttcttctgctgctagtggtaatcatacctcgaacaacattaatacatcg
ggagcgccgacattagcagcagcagtggcggcggcagcagcggcggcatctacagttaca
gttcacaataatcctgccgtacaacaacatgcaccagcgcccacgttacaaggtaatcca
tcaatagcatccgttacagcgtcctcagcaaattccaacaacaattcaacacaacaaata
caaggccaatctgtgattcaagctacaccgacaattgcattttcagcagttgcaaaacat
aatacatcacatcttgaaaatggccctgtacatggtggcgcttcttatgctatagttggc
ggctctcagcagcaacaattatcaaatcttcaagcgaattcctctcatttacaaaatgcc
cataatacttccaataactcgacagtaggtagcattgcaaatgtagtacaacaaggagca
aatcctgctaatgttaataatttggcagcatctgcagtcaattgcatttcaccaaatggt
attgccggtttgcaacaagctctgaacgcacagcaacaagtactgggtatgggagcaaac
aacaataataataacaatgcccgtgcatcgccaggactgctatcacctaaacatatgaat
ggattacctgttacgagtgtagctaataatacctcatctgtagatgctatctcattgaaa
acaatggcacaagaagccattaatcgatctgtaatcgatacaaataatctttcacaacaa
caagcgtctagcctcgataacagacaacaacaacagcagcaacaagtactccaacagcat
ttttcatcagatacaactgccaatacacatcaacaacaacagcagcagcaacaaacaaat
accacagcaggtctagttgccgccgtgactgcatcaacaaatggacctacaactcttggt
ggcaattcagctggtaataatggtggcaatgttggtcctattggtagtaatataaatgca
tcagctttaacaaatgctgccggtcagcagcccataggagcaggtgcatcatctgcagga
aataagcaacaacaacaattatcgcaacaacagcagcagccaacaaatgaagcccacata
ccaccactgttaggtgtggctccattaggtccctcgcctctgcaaaaggatcatcaatta
caattccaaatgatggaagcagcttattatcatttaccaacacctagtgattcggaaaaa
ctaacaacatattttcatcgaacaccagttcaaacgccagcacactatcctcagcaacaa
cttccaatttacgatacagttgaattttatcaacgtctatcaaccgaaacactattcttt
gtgttctactatatggaaggttcaaaagctcaatacttggcagcaaaggctctgaaaaaa
caaagctggcgttttcacacaaagtatatgatgtggttccaaagacatgaagaaccaaaa
attattaatgatgattacgaacaaggtacgtacatctattttgattatgaaaaatggagt
caacgaaaaaaggaaggattcacatttgaatacaagtacttagaagataaagaattgaat
tga
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