Lucilia cuprina (Australian sheep blowfly): 111679328
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Entry
111679328 CDS
T06013
Name
(RefSeq) regulator of nonsense transcripts 3B
KO
K14328
regulator of nonsense transcripts 3
Organism
lcq
Lucilia cuprina (Australian sheep blowfly)
Pathway
lcq03013
Nucleocytoplasmic transport
lcq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lcq00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111679328
03015 mRNA surveillance pathway
111679328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcq03019
]
111679328
Messenger RNA biogenesis [BR:
lcq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
111679328
mRNA cycle factors
P-body specific factors
111679328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
111679328
NCBI-ProteinID:
XP_023296649
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All DBs
Position
6:52151507..52155648
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AA seq
427 aa
AA seq
DB search
MAKDEKTGTKRSRRDRGRDKAKPPTKIVIRHLPPTMTEEEFLKQIDPLPAHDFYYYAEAD
WSLGFDATCRAYITFKNYDDVFLFRDRFDGYVFVDNKGNEYAAIVEFAPFQGFLKNKSRG
SDNKVNTIEQESHYQQFLKKLEEEREAASKGGETKLEFSLDSKKEEITSTPLLQYLATKK
EKRREDAKKRTAEKKRRREEEKEKRKQNQPTAQPIKVLTPEVSNKKADNSETKTNQTREE
PKNARARRREERNRLRHEAYLQKKKAFEEQKKLGGLTTNAEKEAGNNQNKKEEEHKKDKG
NESDAKTSSDTASKPVEILKKSKADELTESVRNFIFTAATNLPTVTAEDKTDKETKTEIE
SKTKSTEDLEKLQDKLAKVDINKNASNMEEDRKPVREEKNKREKLTQKQLEEKREERRIR
NKALTQA
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagatgagaaaacgggaacaaaaagatctcgtcgagatagaggacgtgacaaa
gcaaaaccaccaacaaaaattgttatacgtcacttgccacccaccatgaccgaggaagag
tttcttaagcaaattgatcctttgccggcacatgacttttattattatgccgaagcagat
tggtccttaggatttgatgccacttgtcgagcctatataacatttaagaattatgatgat
gtttttctatttcgtgaccgttttgatggctatgttttcgtggacaataagggtaatgaa
tatgcggccatagtggaatttgcaccatttcagggatttcttaagaataaatcacgtggc
agtgataataaggttaataccattgaacaggagtcccactatcaacaatttcttaagaaa
ctagaggaagaacgcgaggcggcctctaaaggaggagaaacaaaattggaattttctttg
gatagcaaaaaggaagaaataacttccacacctttgctacaatatttggctactaagaag
gagaaacgacgtgaggatgccaagaaacgtactgcagaaaagaaacgacgtcgtgaagag
gaaaaagagaaacgtaaacaaaatcaacccactgcccagcccataaaggtattaactccc
gaagtctctaacaagaaagccgataattccgaaacgaaaactaatcaaactagagaagaa
cccaaaaatgccagagctcgtcgtcgcgaggaacgtaatcgtttaagacatgaggcttat
ttgcaaaagaaaaaagcgttcgaagagcaaaagaaactgggaggtctaacgacaaatgcg
gaaaaagaagcaggcaataatcaaaataaaaaagaggaagagcacaaaaaagataaaggc
aacgaaagtgatgctaaaacctcctctgataccgctagcaaacctgtagagattttaaag
aaatctaaagccgatgaactaaccgaatctgtacgcaattttattttcacagctgccacc
aacttacctacggtaacggcggaggataaaacagacaaagaaactaagacggaaatagaa
agtaaaactaaatctacggaggatttggaaaagttacaggataaactagcaaaagttgat
atcaataaaaatgcttcgaatatggaagaggatagaaagcctgtcagggaggaaaaaaac
aaacgggaaaaattgacacaaaagcaattggaagaaaaacgtgaggagcgacgcataaga
aataaggcactaacacaggcataa
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