Lucilia cuprina (Australian sheep blowfly): 111679364
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Entry
111679364 CDS
T06013
Name
(RefSeq) probable ATP-dependent RNA helicase DDX55 homolog
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
lcq
Lucilia cuprina (Australian sheep blowfly)
Brite
KEGG Orthology (KO) [BR:
lcq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lcq03009
]
111679364
Enzymes [BR:
lcq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111679364
Ribosome biogenesis [BR:
lcq03009
]
Eukaryotic type
Pre-60S particles
Helicases
111679364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
111679364
NCBI-ProteinID:
XP_023296695
EnsemblRapid:
LOC111679364
LinkDB
All DBs
Position
4:81670250..81672416
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AA seq
604 aa
AA seq
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MSRKKWTALDKPPLSEPVLEIIQDMGFSLMTPVQTATIPLLLARKDVSAEAVTGSGKTLA
FLVPLLEMLQRRHKETPWLPKEIGALIISPTRELALQISEVLERFLEHEELNYLRQKLIV
GGNSIEDDIKTLLKDGPCILVCTPGRLEDLFQRKGDLNLAARMKSLEFLVLDEADRLLDL
GFKATINNILAYLPRQRRTGLFSATQTTEVTDLIRAGLRNPVLVSVKEKSTINTPIRLQN
YYTLLEADEKFIALLHFLKSSKAKDSKIMVFFPTCACVEYWSEIMPQFLKDRSILGIHGK
MKNKRKNIIERFRKEDKSILLCTDVLARGLDVPEIDWVIQWDPPSNAASFVHRVGRTARQ
GNEGNALVFLLPSEDAYATFLKINQKVELEEMDDLGFDRNQLKPTLEKLHKLQASDKGLY
DKGVRAFVSHIQAYRKHECNAILRLKDMDMGKAATGYGLLQMPRMPELKTLNADNFIAPN
FEVDVNKLTYKNAQKEQARQEKVKTYEETGQWPGKKKHKKQTEAWDQTKKAKMDVKTKKE
LRKAKKQRKKADEAANGAKGKKRKQQFTQEDLDELANDIRLFKRLKKNKISEEDFNKEMG
IDED
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgcaaaaaatggactgctctagataaaccaccattatctgaaccggttttagaa
attatacaagatatgggctttagtttaatgacaccagtacagaccgctactatacccttg
ctattggctcgtaaagatgtctctgcagaagctgttaccggttctggtaaaactttagct
tttcttgtgcctcttttggaaatgctacagcgtcgccataaagaaaccccttggttgcct
aaagaaataggtgctttaattatatcacccactagagagttggctttacagatatcagaa
gtattggaacgttttttggaacatgaagaattaaactatttacgccagaaacttatagtg
ggtggcaacagtatagaggatgatattaaaacattgttaaaagatggtccttgtatattg
gtatgcacaccaggcagattagaggatttatttcaacgtaaaggtgatttgaatttggca
gctagaatgaaaagtttggaatttttggttttagatgaagctgatcgtttattggatttg
ggttttaaagctaccattaataatattttggcctatttaccacgtcaaagacgtactgga
ctattttcagccacacaaactaccgaagtaacagatcttataagagctggtctccgtaat
cctgttttggtatcggtcaaagagaaatcgaccattaatacacctattcgtttacaaaac
tactatactttattggaggccgatgagaaatttatagctttattacattttctcaagtct
agtaaagctaaagatagcaaaattatggttttctttcccacctgtgcctgtgttgaatac
tggtcggaaataatgccacaatttctaaaagatcgttccattctagggatacatggaaaa
atgaaaaataaacgtaaaaatattatagaacgttttcgtaaagaagataaatcgatattg
ttgtgtacggacgtgttggccagaggtttagatgtgcccgaaattgactgggttatacag
tgggatcctccctcgaatgctgccagttttgtacatcgtgtgggacgtaccgctcgccag
ggtaatgagggcaatgctttggtattccttttgccctcggaagatgcttatgcgacattt
ttgaaaatcaaccaaaaagtggagttagaagaaatggatgatttaggctttgataggaat
caactaaaacccactttggaaaaattacataaattacaggcctccgataagggtttgtat
gacaagggtgtcagagctttcgtctcacacatacaagcctatagaaaacatgaatgtaat
gctattttaagattaaaagatatggacatgggcaaagctgccacaggttatggtcttctg
caaatgccccgtatgcctgaattaaagaccttaaatgccgataatttcatagcacctaac
tttgaagttgatgtcaataagttaacctataaaaatgcccaaaaagaacaggctagacag
gaaaaagtaaaaacctacgaagagaccggacagtggccgggcaaaaagaaacataaaaaa
caaactgaagcttgggaccaaacgaaaaaggctaaaatggatgttaagaccaaaaaagaa
ctaagaaaagctaaaaaacaacgtaaaaaagcagatgaagcagccaatggagcgaaagga
aagaaacgcaaacaacaatttacccaagaagatctcgatgagttggccaatgatatacgt
ttatttaagagattgaaaaagaacaaaattagcgaggaagattttaataaagaaatgggt
atagatgaggattaa
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