Lucilia cuprina (Australian sheep blowfly): 111679691
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Entry
111679691 CDS
T06013
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
lcq
Lucilia cuprina (Australian sheep blowfly)
Brite
KEGG Orthology (KO) [BR:
lcq00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lcq01009
]
111679691
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcq03019
]
111679691
04131 Membrane trafficking [BR:
lcq04131
]
111679691
03036 Chromosome and associated proteins [BR:
lcq03036
]
111679691
Enzymes [BR:
lcq01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
111679691
Protein phosphatases and associated proteins [BR:
lcq01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111679691
Messenger RNA biogenesis [BR:
lcq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
111679691
Membrane trafficking [BR:
lcq04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
111679691
Chromosome and associated proteins [BR:
lcq03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
111679691
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
111679691
NCBI-ProteinID:
XP_023297064
LinkDB
All DBs
Position
3:12081094..12094155
Genome browser
AA seq
1107 aa
AA seq
DB search
MSSPIVTRRGAQKAKIQTRAMVKSAVTAAANVNSVENRKPSAALLEAKRKAKLLKMQQQN
QQEIVVKDIFQNAVNAKYMTQRPTGLIYDESMSQHRCLWDSEHPECPERFIRVLDRCREL
KLVERCQILPSRRATKDEVMLLHSEEHYQLLEKTSGVNDDVKMEDLSSQFDSVYIHPTTF
DLSLLATGSTIDLIESVINGNIQNGMAIIRPPGHHAMKAEFNGYCFFNNVAIASQYALDI
LKLKKIMIIDWDVHHGQGTQRFFYNDPRVLYFSIHRFEHGTFWPNLKESDFDAVGHGPGL
GYNFNLPLNKTGMGNGDYLAIFQQILIPVAVEFQPELIIISAGYDAALGCPEGEMEVTPA
FYPHLINPLIKLANSRLAVVLEGGYCLDSLAEGAALTLRALLGEPCPLLVEKLQPPCPSI
QESILNCIYSHRPYWKCLQVQDTYTMEDLNNVNPQPNLHKVSRLFIGGAPLPERFPTRGT
GPKIPLDVIERNALRLKTLKEETKLFSPQVRVCYVYDEFMLKHSNTYEEGHPEQPERISK
IFEMHQEYKLLNRMQHVQSRTATTDEICLAHTRSHVNAIRRIGEKDELQNMGAKYNSVYF
HPTTFDCATLAAGSVLQVVDKVVKGEARSGVCIVRPPGHHAESDVPHGFCIFNNIAIAAQ
YAIRDHGLKRVLIVDWDVHHGNGTQHIFESNPQVLYISIHRYDNATFFPKSKDGDYDAVG
KGAGVGFNVNIPWNKKGMGDMEYVMAFQQIIMPIAYEFDPELVLVSAGFDAAIGDPLGGC
KVTPEAYGLFTHWLSALANGRIIVCLEGGYNVNSISYAMTMCTKSLLGDPIPAINLNGSA
SRPPTVAYMSCMETLQNCIGVQQRYWKSLAFGKRLPQTSGENNNEDFLSATLQNLDITRD
DVQGAAGGSQDTDTNVSLEASGSKPKVKVKTLTEFLTEHMQAFENNEMFAVVPLKNCPHL
SQLHLGDVPKTINTSMPCHECSSTAENWMCLSCQRVLCGRYVMEHMLYHNLETSHPLALS
FSDLSVWCYPCESYIDNSKLHAYKNLAHRHKFGEDMQWSYDDEGDQQQQNNRCHSDTDSY
DDDESSDSLRQQLENNYYIHLNYDTNN
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgccaattgttacacgaaggggtgcacaaaaagctaaaatacaaactcgcgca
atggtcaaatcagcagtgacagcagcagctaacgtcaattcagtcgagaatcgcaaaccg
agtgcggcacttctggaggcaaaacgcaaagcaaaattactaaaaatgcaacaacaaaat
caacaagaaattgtagtcaaggatatatttcaaaatgcggtgaatgctaaatacatgact
caacgacccactggtcttatttatgatgaatctatgtctcagcatcgctgtctctgggat
agtgaacatccagagtgtccagaaagattcatacgtgttttagatcgttgtcgcgaatta
aaattagttgaacgctgtcaaattttaccctctagacgtgctaccaaggatgaagtaatg
cttctgcatagcgaagaacattatcaattgttggaaaaaacttcgggtgttaatgatgat
gttaaaatggaagatttaagttcacagtttgattcggtttatatacatccgaccactttt
gatttgtcattattggcaacaggctcaacaattgatttgattgaaagcgttataaatggt
aacatacaaaatggtatggccattatacgtccaccaggacatcatgctatgaaagctgaa
ttcaatggctattgtttctttaataatgtagcaatagcttcacagtatgccttggatatt
ttgaaattgaaaaaaatcatgataatcgattgggatgtacatcatggtcagggtactcag
cgattcttttacaatgatcccagagtactttacttttcaatacatcgttttgaacacggc
accttttggccgaatctaaaagaatccgattttgatgctgttggtcatggtcccggtttg
ggttataatttcaatttaccccttaataagacgggcatgggtaatggcgattatttggcc
atattccagcaaatactgataccagttgctgtggaatttcaaccagaattgataataatt
tcagctggttatgatgctgccttgggttgccctgagggtgaaatggaagtaacacctgcc
ttttatccacatcttattaatcctttaattaaattggccaattctcgtttggcggttgtt
ttggaaggaggctattgtttggattcgttagccgaaggagctgctttaacgttgagagcc
ttactaggtgaaccttgtccgttgctggtggagaaattacagccaccttgtccttccata
caagagtctatattaaattgcatttattctcatcgtccttattggaaatgtttgcaggtg
caagacacctacaccatggaagatttaaacaacgttaatccacaaccaaatctacataaa
gttagtcgtttattcattggcggtgcacctttgcctgaacgttttcccacacgtggtact
ggtcctaaaattccattggatgtcatagaacgcaatgcattacgccttaagacactaaaa
gaagaaacaaaactattttcaccacaagtacgtgtctgctatgtatacgatgaatttatg
ttaaaacattcaaatacctacgaagagggacatcccgaacaacccgaacgtataagtaaa
attttcgaaatgcatcaagagtacaaattattgaatcgcatgcaacatgtacaatcacgt
acggctacaaccgatgaaatctgtttggctcatactcgctcacatgttaatgcgatacgt
cgtattggcgagaaagatgaactgcaaaacatgggcgccaaatataattccgtctatttc
catccaacaacttttgattgtgccactttggcggccggttctgtattgcaggttgtcgat
aaagtagttaaaggcgaggcacgcagtggagtgtgtattgtacgaccaccgggacatcat
gcggaatcggatgttcctcatggtttttgtattttcaataatatagcaattgccgctcag
tatgctattagagatcatggtctcaaacgtgttcttattgtcgattgggatgtgcatcat
ggcaatggcactcagcacatattcgaatcgaatccacaggtcttgtacataagtattcat
cgttatgacaatgccacattcttccctaaaagtaaagatggtgattatgatgctgtgggc
aagggagctggtgtaggtttcaatgttaacattccctggaataagaaaggcatgggtgat
atggagtatgtaatggccttccaacagattatcatgcccatagcgtatgaatttgatcca
gagttggttttagtttcggccggttttgatgctgctattggagatccacttggtggctgc
aaagtaacacccgaagcctatggtctcttcacgcactggctatcggccctagctaatgga
cgaattattgtgtgcttagaaggaggctacaatgtcaattccatatcatatgccatgacc
atgtgtacaaaatccctacttggcgatcctataccagcaataaatctaaatggtagtgct
tcgcggccaccaactgtagcgtacatgagctgcatggaaacattacagaactgtatagga
gtacaacaacggtattggaaaagtttagcttttggaaagagattgccacagacatcgggt
gaaaacaacaatgaggattttctttctgctactttacaaaatttagatattacaagggat
gatgtccaaggcgctgctggtggttctcaagatacagacaccaatgtatcactcgaggca
agtggcagtaaaccgaaggtaaaagtaaaaactcttacagaatttctcacagagcacatg
caggctttcgaaaataatgaaatgtttgctgttgtaccattaaaaaattgtcctcatttg
tcccagttacatctgggggatgtaccaaaaacaataaatacatcaatgccctgccatgaa
tgttcatcaacggccgaaaattggatgtgtcttagttgtcaacgggttttatgtggccgt
tacgtaatggagcatatgctgtatcataatttggaaacatcccatccattagcattaagt
tttagtgatttatccgtctggtgttatccttgcgaatcatatatagataatagtaaatta
catgcctataagaacttggcacatcgtcataaatttggtgaagacatgcagtggtcatac
gatgatgagggcgaccaacaacagcaaaacaatcgatgtcacagtgatacagatagttat
gatgacgacgagagcagtgatagtttaagacaacaacttgaaaataactattatatacat
ttgaattatgatacaaataactga
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