Lucilia cuprina (Australian sheep blowfly): 111680185
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Entry
111680185 CDS
T06013
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
lcq
Lucilia cuprina (Australian sheep blowfly)
Pathway
lcq03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lcq00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111680185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcq03021
]
111680185
03036 Chromosome and associated proteins [BR:
lcq03036
]
111680185
Transcription machinery [BR:
lcq03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111680185
Chromosome and associated proteins [BR:
lcq03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
111680185
PBAF complex
111680185
GBAF(ncBAF) complex
111680185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM
SWIRM-assoc_3
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
111680185
NCBI-ProteinID:
XP_023297584
LinkDB
All DBs
Position
4:complement(99059970..99064399)
Genome browser
AA seq
1151 aa
AA seq
DB search
MCTLAPKKDGSPNIEFYNSPESLQGFESIRLWLQKNCKKYLASSNEPITKESLAQLLIQF
LQYVEAKLGKNSAEPPATRIPMRCFLDFKSGGGLCIIFSTMFRFRAEQRGKKFDFSVGKN
PTRKDPNIQLLIDIEQALVEADLYRIPYIFIRPEVDKQLATRLREILATRRVEIVSDEED
ATHIIYPVVDPHPDEYARPIFKRGNCVMMHWYYFPESYDTWTPNSLELPDNVPENPESPA
ERWRVSASWILDLEQYNEWMAEEDYEVDEFGKKKMHKQRLSIDDIMSGGIDDKKKAISGT
PIAAKQKRRRSPSPSSSKSGKRKRSPAVLHKKSRNDEEDEDLTRDMDDPPAETNLQEVIK
TTSLQSTASPAPASKSRADNDMMPIKGGTLTDLDDEMTGGSGTQALSACDGENSQTGKTS
ENSNTQEFSSSAKEDMEDNVTEQTHHIIVPSYSAWFDYNSIHVIEKRAMPEFFNSKNKSK
TPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDAE
LRPTPMGPPPTSHFHILSDTPSGIQSLNPQKTQQPSAAKSLLDLDKKPSGGPSKEGKEDS
LDKAPVGIKTEPVENGSAATASGQFGLKLDQYAKKPAAMKNRTAASMSREWTDQETLLLL
EGLELHKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDDGGFLGPLGCQPIPFSKSG
NPIMSTVAFLASVVDPRVAAAAAKAAMEEFAAIKDEVPAAIMESHLKNIEKATSSGKFNP
SYGLVSSGIAGTTADKEDEDPNAATVGTVPHGSTDEEMRDLSKKDDKDLTKSPSKSKDES
KDKDDKEKTEKETDNKKDENAGVMDVKDIKTEESSGNGAEGVSKEIDASKQVFNEANVQT
AAAAALASAAVKAKHLAALEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGL
EYQRQQLITERQQFHLEQLKAAEFRARQQAHHRLQQEQQWQGGAAGTATAAGTTVPAASG
AAPSSGGTQSSTLPGAPSVGPQIGPSATMPGAPTAAPSTHVGTPGPNSASGPIAGGPPAG
QSTTPMDTTPAVGAPQPALASEAPTATPGSGPSIPPSNPTVPIPTNVSVPPQPTPNIPPA
PGGPTVATTSS
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgtgtaccttagctcccaagaaggacggcagtccaaatattgaattttataactcgcca
gagtcattacaaggttttgaatccatacgtctatggttacagaaaaattgtaaaaaatat
ttggccagtagtaatgaacctataacaaaagaatctctggctcagttattgattcagttt
ctccaatatgtggaagcaaaacttggcaaaaattcggctgaaccaccagcaacgcgtata
ccgatgcgttgttttttggattttaaatcaggcggtggattgtgtattatattctctacc
atgtttcgctttcgcgctgaacagaggggcaagaaatttgatttttccgtgggaaagaac
ccaactcgaaaagatccaaatatacaattattaattgatatcgagcaagctttagtggag
gcagacctttatcgtattccatacatttttatacgtcctgaagtagataagcaattggcc
acacgtttgcgtgaaatattggcaactcgacgagtagaaatagtttcggatgaagaggat
gccacacatattatataccctgtggttgatcctcatcccgatgaatatgcacgtcccatt
tttaagcgtggcaattgtgtgatgatgcactggtattattttccagaatcgtatgataca
tggacaccaaattctttagagttacccgataatgtaccagaaaatcctgaatctccggct
gaacgctggcgtgtatctgcctcatggattctagatctcgagcagtacaatgagtggatg
gcggaagaagattacgaagtagatgagtttggaaaaaagaaaatgcataagcagcgttta
tcgattgatgacattatgtcgggtggtatagacgacaagaagaaagcaattagcggtact
ccaatagctgcaaagcaaaagcgtagacgatctccatcgccgagttcttctaaatcggga
aaacgtaaacgttcccctgctgttctacataaaaagtcacgcaatgatgaggaggatgaa
gatttaacacgtgacatggacgatccgccagcagaaactaatctacaggaggttatcaaa
accacttccttacaatccactgctagtccagcacctgctagcaaatctagagctgataat
gatatgatgccaattaaaggaggtactttaactgatttggatgatgaaatgactggtggc
agcggcactcaagctttgtcagcatgtgatggtgaaaattctcaaactggaaaaaccagt
gagaatagcaatactcaggaattctcatcatcagccaaagaggacatggaagataatgtt
actgaacagacacatcatattatcgtgccctcttattcagcttggtttgattataattct
atacatgtgattgaaaaacgagcaatgccggagttctttaattccaaaaataaatcaaag
acgccagagatttatatggcttatagaaacttcatgattgatacgtaccgtctcaatcct
accgagtatttaaccagtacagcctgtagacgtaatttggctggtgatgtttgtgcgatt
atgcgagtccatgcattcctcgaacagtggggcttgattaattatcaaattgacgcagaa
cttcgtcccacgcccatgggaccaccacccacatctcatttccatattttatctgataca
ccttctggtatacagtcattaaatcctcagaaaactcaacagccatcagctgctaaatct
cttctcgaccttgataaaaagccatcgggtggaccaagcaaggagggtaaagaagattca
ttagataaggcgccagtgggtataaaaactgaaccggttgaaaacggaagtgcagccact
gcttctggacagtttggtttaaaactcgatcagtatgctaagaaaccagcagcaatgaaa
aatcgcactgctgctagcatgtctagagagtggacagaccaggaaacactacttttattg
gaaggcttagaattacacaaagacgattggaataaagtgtgtgaacatgtaggtacacgc
acccaggatgagtgtattttacattttctacgactaccaattgaagatccctaccttgaa
gacgatggtggatttttgggtcctttaggttgtcaacctattccattcagtaaatcaggc
aatcccatcatgtccacagtagcatttttagcttccgttgtagatccacgcgtagctgca
gcagcggctaaagcagcaatggaagaatttgctgcaattaaagatgaagtgccagcagca
attatggaaagtcatttgaagaacatagaaaaagctacatcatctggcaaatttaatcca
tcttacggattagttagtagcggtattgccggaacaactgctgacaaagaagatgaagat
cctaatgcagcaacagtaggtaccgtacctcacggatcgactgatgaagaaatgagggac
ttgtcaaagaaagacgataaagatcttaccaaatccccctccaaatccaaagacgaatct
aaagacaaagatgacaaagaaaagacagaaaaagaaactgataataaaaaagatgaaaat
gctggtgtaatggatgtcaaggatattaaaaccgaggaatcaagtggaaatggagctgaa
ggtgtctcaaaagaaattgatgcatctaaacaagtattcaatgaggcaaatgttcagact
gctgctgctgccgccctagcatcagctgcggttaaagccaaacacttggctgctttagaa
gaacgaaaaattaagtcattggttgctctcctagtggagactcaaatgaaaaagcttgaa
ataaaattgcgtcacttcgaggaattagaaactacaatggaacgtgagcgagagggttta
gaatatcaaagacaacaacttataacagagcgccaacaattccatcttgaacaattgaaa
gcagctgaatttagagccagacaacaggctcaccatcgtctccagcaggaacaacaatgg
caaggtggcgcagcaggtaccgcaactgccgcaggtacaacagttccagctgcaagtggt
gccgctcctagttcaggtgggactcaaagtagtacattacctggggcaccatcagttgga
cctcaaataggtccaagtgctactatgccaggagcccctactgccgctccatcaacacat
gttggaacaccaggtcctaattctgccagtggtccaatagctggtggtcctcctgcaggg
caatccaccactcccatggatactacaccagcagtcggtgcgcctcaacctgcattagca
tcagaagcacctactgcaacaccaggctcagggccatctataccaccttcaaatcccaca
gttccaatacccacaaatgtatctgtccctcctcaacctacacccaacattccaccggca
ccaggaggtccaacggttgctaccacatcatcttaa
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