Lucilia cuprina (Australian sheep blowfly): 111680261
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Entry
111680261 CDS
T06013
Name
(RefSeq) chromatin assembly factor 1 p55 subunit
KO
K10752
histone-binding protein RBBP4
Organism
lcq
Lucilia cuprina (Australian sheep blowfly)
Pathway
lcq03082
ATP-dependent chromatin remodeling
lcq03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lcq00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111680261
03083 Polycomb repressive complex
111680261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcq03036
]
111680261
Chromosome and associated proteins [BR:
lcq03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
111680261
Histone modification proteins
HAT complexes
HATB complex
111680261
HDAC complexes
Sin3A-HDAC complex
111680261
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
111680261
PRC2.2
111680261
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
111680261
Heterochromatin formation proteins
Other heterochromatin formation proteins
111680261
Chromatin remodeling factors
NuRD complex
111680261
NuRF complex
111680261
NuRF complex (fruit fly)
111680261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
EIF3I
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
WD_LRWD1
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_DCAF12
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_SPT8
NBCH_WD40
MIOS_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
111680261
NCBI-ProteinID:
XP_023297662
LinkDB
All DBs
Position
4:complement(85452805..85454804)
Genome browser
AA seq
429 aa
AA seq
DB search
MVDRSDNAESFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTKQE
GKDYSVHRLILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEI
EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQ
KEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHL
LHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKT
VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSAE
DAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENVYNDEEPEIP
ASELEGGTV
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggtcgatcgcagtgataatgcggaatcatttgatgatgccgtagaggaacgcgttatc
aatgaggagtataaaatctggaagaaaaatactccatttttatacgatttagttatgact
catgccttggagtggccttctttaacggctcaatggctgccggatgtaaccaaacaggag
ggtaaagactattcggtacatcgtttgattttgggcactcacacttcggatgaacaaaat
cacttgctaatagctagtgtccagctgcctagtgaggatgcccaatttgatggctctcat
tatgacaatgagaaaggagaatttggtggttttggttcggtgtgtggtaagattgaaatt
gaaataaaaatcaatcatgagggtgaggtaaatagggctcgctacatgccgcaaaatgct
tgtgttattgctaccaaaactccctctagtgatgttttagtttttgattataccaaacat
cccagcaagcccgagccttcgggagaatgtcaaccggatttgagattgcgtggccatcaa
aaggagggctatggtttgtcgtggaatccaaatttaaacggctacttactgtcagcatct
gacgatcataccatatgtttgtgggacataaatgctacacccaaggagcatcgtgttatt
gatgctaagaatatttttactggccatactgcagtcgttgaggatgtagcctggcatttg
ttgcatgaatctttgtttggctctgtggctgacgatcaaaaacttatgatttgggacaca
cgtaataataacacttccaaaccttcgcacacagtagatgcccatacggccgaagtaaat
tgtcttagtttcaatccatattcagaatttattctagccaccggctcggctgacaaaacg
gtagctctgtgggatttgcgtaatcttaaattgaaattacattcctttgaatcgcataaa
gatgaaatcttccaagtacaatggtctccccataatgaaactattttggcttcatcgggc
accgatcgtcgtttgcatgtctgggatttgtcgaaaatcggtgaagagcaaagtgccgaa
gatgctgaagatggtccaccggaattgctcttcattcatggcggtcatacggccaaaata
tcagatttctcttggaatccaaatgaaccgtggataatatgctccgtatcggaagataat
attatgcaagtatggcaaatggcagaaaatgtttacaatgatgaagaacccgaaatacca
gcttctgaactggaaggtggtacagtttaa
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