Lucilia cuprina (Australian sheep blowfly): 111680596
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Entry
111680596 CDS
T06013
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
lcq
Lucilia cuprina (Australian sheep blowfly)
Pathway
lcq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lcq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111680596
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcq03019
]
111680596
03012 Translation factors [BR:
lcq03012
]
111680596
Enzymes [BR:
lcq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111680596
Messenger RNA biogenesis [BR:
lcq03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
111680596
Translation factors [BR:
lcq03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
111680596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
nSTAND3
AAA_19
AAA_22
ABC_tran
ResIII
PhoH
NB-ARC
AAA_7
T2SSE
Rad17
SRP54
AAA_11
ATPase
TrwB_AAD_bind
AAA_16
Motif
Other DBs
NCBI-GeneID:
111680596
NCBI-ProteinID:
XP_023298034
LinkDB
All DBs
Position
2:32467760..32474380
Genome browser
AA seq
964 aa
AA seq
DB search
MSEYRRGRGGRGGRGRGGSSGGRPPWLKGKDIGLYYRDRQRQRNKEEENNGRIKLNPSVD
IPSGVLAQVENCLQEFERDSEDDRVCDEFAQHFRNLLDINFEEFLEKSKKSVRNTLEHIN
LEANNERLKASMLEKEESQQYRKLYDMRQRLPAMKQRQDVLKAINENQVVLIVGSTGCGK
TTQVPQILLDEFTNNGRGAECRIVCTQPRRISAISVAERVAYEREESLGSSVGYQIRLEN
RLPRDYGSILYCTTGILLQKMQTNPLLIGINIIILDEIHERSVETDLLMAILKKILPHRA
DLKVILMSATVSEETFCEYFNNCFTLYIEGTLFPVEVLYLEDVLQETGFTGFEKPAITQN
SHGRGRRRDDREGERNNQYNQMISTYLPALQGKYDRQVIDTIRKYKDTEGCENLLFLEHL
IFHICEHKPPGAILVFLPGFERISKLTTQLQKPASPKHRELAQKIQVYPLHSMMPTVNQK
SIFKPAPDGMRKIILSTILAETSVTIDDVVYVINTGKTKSKDYDVSQNIQTLEEQWVSKA
NTQQRKGRAGRVQPGICYNLFTRIRERLMFEVPIPEILRSKLESIILNLKLLHISNPYEF
LKTLISVPNEQAISHGLNLLKRIEALDVNDNLTPLGLHLARLPIDPQMGKMILMSALFRC
LDPITSAAAGLSYKSPFYTPMGLEKKVDAIKRELSNNCKSDHLLIHNVIEGYREAKDNNC
NMNYCYENFLSHTTLTQIENMKRQFADLLRNSSFLESSNCCGKSSNVNSSNVPLLRAIIA
AGLYPNIAFLRQVKQRGNRCHALHKMSTPEDKRVNFHPSSINCGQTSFDSNYFVYLQKQR
SKEVYLLDATMVFPMALLIFGDGVQKGITDEKQPYISVANKYFFKCNENSSLFILRLREK
LGVLLQKKVLYPSPIEINSKDEKLIKAIQILLSLDDAGDLSDQFLSTDDEDDGSIPSQRF
KSTI
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaatatcgtagaggacgtggtggaagaggtggccgtggaagaggaggtagtagt
ggtggccgaccaccatggctgaaaggtaaagatatcggtttatattaccgtgatcgacag
cgccagcgcaacaaggaagaagaaaacaatgggcgcatcaaactcaacccatctgtagat
attccaagcggtgttctagcacaggttgaaaactgcctccaggaatttgaaagagacagt
gaagatgatcgagtttgtgatgaatttgcacaacattttcgtaatttacttgatattaat
ttcgaggaattcctagagaaatccaagaagtcagttagaaacactttggaacacattaat
ttagaagctaataatgaacgtttaaaagcatcaatgttggaaaaagaagaatcgcaacaa
tatcgaaaactttacgatatgcgtcaacgtttaccagccatgaagcagagacaagatgtt
ttgaaagccattaatgaaaatcaagtggttcttattgtgggcagtactggatgtggtaag
acaacacaagtacctcagatattgctagatgaatttacaaataatggtcgaggggcagaa
tgtcgtattgtttgtacgcaacctagaagaatatcggctatatctgtggccgaacgtgtg
gcttatgagagagaagaatcattgggttcttcggtgggttatcaaatacgtttggaaaac
cgcttgcctcgagattacggttcaattttatattgcaccactggtatattattacaaaaa
atgcaaactaatcctttattaattggtataaatatcataatattggatgaaattcatgaa
cgtagtgtagaaactgatcttttaatggctatacttaaaaagatattacctcatcgtgcc
gatcttaaagtgatattaatgagtgccacagtttcagaggaaacattttgtgaatatttt
aataattgttttactctctacattgagggtactctgtttcccgttgaagttctttatctg
gaggatgttttacaagaaaccggatttactggatttgaaaaacccgcaattactcaaaat
tctcatggtcgtggtaggagacgtgatgatagagaaggtgaacgtaataatcaatacaat
caaatgatatctacgtatttaccggcattacaaggcaaatatgatcgtcaagtaatcgat
actataagaaaatataaagatacagagggttgcgaaaatttactctttttggaacattta
atatttcatatatgtgaacataaaccacccggagctattttggtatttttaccaggtttt
gaaagaatttctaaattgacaacgcaattgcaaaaacctgctagcccaaaacacagagaa
ttggctcaaaagatacaagtgtatccgctgcattcaatgatgcctacagtcaatcagaag
agtatttttaagcccgccccagatggtatgcgtaaaattatattatcaactattttggca
gagacttcagtaaccatagacgatgtggtttatgttataaatacgggtaaaactaaaagt
aaagattacgacgtttcacaaaacatacaaaccttagaggaacaatgggtcagtaaagcc
aatacgcaacagcgtaaaggacgtgctggacgtgtgcaaccgggtatttgttataattta
tttaccagaattagagaacgtctaatgtttgaagtgcctataccggaaattttgcgcagt
aaattggaatctattattttaaatcttaaacttttacacatatcaaatccttacgaattt
ctaaaaactctaattagtgtaccaaacgaacaagctattagtcatggcttaaatttatta
aaacgcatagaggccttagatgttaatgataatttaacaccattgggtttgcatttagcc
cgcttacccatagatccgcaaatgggtaaaatgattttaatgtctgccctttttcgctgt
ctggatcccataacctctgctgctgctggtttatcttataaaagtcccttttacacaccc
atgggtttggaaaaaaaggtggatgctattaagcgtgaattgtctaataattgtaaaagt
gatcatttattaatacacaacgttatcgagggctatcgtgaggccaaagataacaattgt
aatatgaactattgctatgagaattttcttagtcacacgacacttacacaaattgaaaat
atgaaacgacaatttgctgatttattgagaaattcaagttttttggaatcatcaaattgt
tgtggtaaaagttcgaatgttaattcgtcaaatgtgcctctgttgagggcgattattgct
gctggcctttatccaaatatagcatttttaagacaagtgaagcaaagaggcaacagatgt
catgcgctgcataaaatgtcaacaccggaagataagcgtgtaaattttcatccttcctct
attaattgtggtcagacatcatttgattctaattattttgtttatttgcaaaaacaaaga
tctaaagaagtgtatttattggatgccactatggtttttcccatggccctgttaatattt
ggtgatggtgttcaaaaaggcataactgatgaaaaacaaccctacataagtgtagctaat
aaatacttctttaaatgtaatgagaactcttcattgtttatactgagattgcgtgaaaaa
cttggcgttctattgcaaaagaaggtcttatacccgtcacccatcgaaatcaatagcaag
gatgaaaagcttataaaggctatacaaattttgctctctttggatgatgccggcgatctt
tctgatcagtttctatcgactgatgatgaagatgatggatctataccttcacaaagattt
aaatccactatctaa
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