Lucilia cuprina (Australian sheep blowfly): 111681072
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Entry
111681072 CDS
T06013
Name
(RefSeq) LOW QUALITY PROTEIN: afadin
KO
K05702
afadin
Organism
lcq
Lucilia cuprina (Australian sheep blowfly)
Pathway
lcq04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
lcq00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
111681072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DIL
PDZ
FHA
PDZ_6
PDZ_2
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
111681072
NCBI-ProteinID:
XP_046804369
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All DBs
Position
4:complement(83336991..83363951)
Genome browser
AA seq
1701 aa
AA seq
DB search
MNLTRSIMFHVRRRPADSQPRRRKKKPLGAANGTNNISQDREGPMLVEVTHSGDGGRRIK
LGNDPIEVGSANTNCLQLFGPSIQPRHCLISLVEGVCTVTPLHTDALTFVNGHHITQPTI
LHNGSVVMFGRVASYRFVDSPTDGRYNLALSQSQLDSACLSESRSPTSPGSWNDEDGALS
STHKSEYDPHNSNPADQTEIDGKLRSNGSEHNNHTNTTLGGNFQSGSGGTAGGGGNAADT
QSLEGNLENETKSISSLKSGGSNSQERSPKMPSSSISAAAHIEPQGQEPILPAVLEFPET
HQELFLRHIISELDVNAPHFKLAPVYSLYLCARYRASTHYRPELQPTERAHKLTIFLHHV
ANLIYNVVQEQYADPRILAFWMANSSEFLHFLKSDRHISAFSVQAQEVLAESVQTAFRNL
VNCFRVELSQTLNQFLSETIDHDSAAGLVLTVLGSAMALLRRCRVNAALTIQLFSQLFHY
INVICFNTIVANSHMCTAEWGKVMTERLQLLELWAERQGLELAADCHLAKINQCAQFLQA
PKTSVEEIQQLACSCFRLNSLQMAALLQQEKIPRNLVDTAIRMAESVADELTRADGREVR
LEESPELHLALLLPDDGFSCDVVRGIPSGLVDFINPLQQQGMCRLAAQPTSIGLWTVYMH
QFNARSSSAMSNKLPQPEVQVIKLHKNSNGMGLSIVAAKGAGQERLGIYIKSVVPGGAAD
ADGRLQAGDQLLRVDGQSLIGITQERAADYLVRTGPVVTLEVAKQGAIYHGLATLLQQPS
PVIQRGNRRMSERDLTRMGTDSNKSMSGGPLLTNNHLPNSKSVPALHHHTGSGTISMANS
KSRSTHSLANTNPNLNNNNNNEQGFYQNLSVYRNQNQSQPILSERPPMPSHSAMNAYNGN
SQQNLQNPILSPINGTNQATNLNQQQQATYQQQQQQQQQHSQHSLMTAPHTSNMPPSRPQ
SAYYQHQATPATNTTQHQHLNPQQQQQQFPQHGHAFSASTTNLSGMQQQQQLQQQLQHMT
PQQQQQYQQQQQSLTLGNRSKSTQNFQRDMQTQQSLRMQQMMAPSMPNINNMYQQQQQQQ
QQQQHNTSLQQHNMSMPSSIAASQSMQNVSSMADDSRYSQSANNSLMETNGGYQQQQQSP
AGGQTLRRNMRAEYIQQQAANGQGGMESAQHSPNFMHEQQRGNFMTLPPKPAMQQQQQLT
PPKQQQQLPPTAPKPMQQNRLSLQQQQQQAYNNSNLYQQQQQQQPTQQPGEDKPPLPPTT
THPLYKATQQITPGMNYVASTIDPPKGGYMPVSAAALQQHKNIHGGNPWEREEREKDLEM
RREHIRQWREQQINELSSLPQRTPQQEEQLKTLILERDFERRAQEMEEQEDESEPSYEKE
NVQEVFRLNQQQNVIQTPVTNFRQTEIKLASLMDNQRPGNNNNSNETSPLNSNRNSAAEA
IPPPVPTQPPPPTTTTTIVTTNSNTSTIQPKSILKNNRYDGSNTAPSSPSKSQKSTSFAD
DKHLQTEHPISSLARDINHLSLTNSNSSNNNAYDNNMNSENSPNSATVPPPPPPERNSSY
LIMSQQKLRNSSIGLLKTATINSADLQKKTSASSILLNNNNNNIQNNLLNMNSANASLQS
SPSSSTMEMYNAAATTATHSNSASPSSSMMLLRDNKRVSFHDEENNYVASAFNNMEYNVT
MEQHMAPSDLNTIREDTNVSR
NT seq
5106 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaactcgttcaatcatgtttcacgtgagaagacgtccagctgattcacagccg
cgtagacgtaagaaaaaacctttgggtgctgccaatgggaccaataatatatcacaagat
cgtgagggaccaatgttagtggaagtaacacatagcggtgatggtggtagacgtattaaa
ttgggaaatgatcctatagaggtcggttcagccaatacaaattgcctacaattattcgga
ccatccatacagccccgtcattgcttaatatcattagttgaaggtgtatgtaccgtaaca
cctctacacacggatgccttgacctttgttaatggtcatcacataacgcagccaactatt
ttgcataacggttcggttgttatgtttggtcgtgtggcatcatatcgctttgtcgattca
ccaactgatggccgttataatttggccttgtcacagtcacaattggattcagcgtgcctc
tctgaaagtcgttcaccaacttcacccggttcatggaatgatgaggatggagccttaagt
tcgacccacaaaagtgaatacgatcctcataacagtaatccagcggatcaaacggaaatt
gatggtaaattacgttcaaatggttctgaacataataatcataccaatacaacattaggt
ggaaattttcaaagtggtagtggtggcaccgcaggtggaggaggcaatgcagcagataca
caaagtttagaaggtaatctagagaatgagacgaaatcaatatccagtttaaaatcagga
ggttcaaatagtcaagaaagatctcctaaaatgccttcatcttcgatctcagctgctgcc
catatcgaaccacaaggtcaagaaccaattctgcctgcagttttagaatttcctgaaaca
catcaggaattatttctaagacatattataagtgaattggatgtaaatgctccacatttt
aaattagctcctgtatattcattatatttatgtgccagatatcgtgcttcaacacactac
cgtccagagcttcagccgacagagcgtgctcacaaactaaccatattcttacatcatgtt
gctaatcttatttacaacgttgttcaagaacaatatgccgatccacgtattctagccttt
tggatggcaaattcttcggaatttttacatttcctaaaatcagatcgtcacattagtgca
ttttcggtgcaggcacaagaggtgttggcggaaagtgtacagaccgcatttcgtaattta
gtaaattgttttagagttgagctgtcgcaaacattgaatcaatttctatcggaaactata
gatcatgattcggccgctggtctcgtgttgactgttttgggttcggctatggcattgttg
agaagatgtcgtgtgaatgctgccttaaccatacaattattttcgcaattatttcattat
attaatgttatatgttttaatacgattgtggccaactctcatatgtgtaccgccgaatgg
ggtaaagttatgaccgaacgtttacaactcctagaattgtgggccgaacgtcagggctta
gaattagcagccgattgtcatctggctaaaataaatcagtgtgcccaatttctacaggca
cccaaaacatctgtggaagaaattcaacagctggcttgctcttgtttccgtttgaactct
ttgcaaatggccgctttactacaacaagagaagataccacgtaatctagtggataccgcc
atacgtatggctgaatcggtagccgacgaactaacacgagctgatggacgcgaagtacgc
ttagaagaatcaccggaattacacttggctctacttttacccgatgatggcttcagttgt
gatgtcgtgcgtggtataccttcgggtttggttgattttatcaatcccctacagcaacag
ggtatgtgccgtttggctgcccaacccacctcgattggtctatggacggtgtatatgcat
cagtttaatgcccgttcttcaagtgctatgtccaataaactaccccaacctgaagtacaa
gttattaaactgcataagaattccaatggcatgggtttatcgatagtggcggctaaaggt
gctggccaagaacgtttgggtatttatattaaaagtgtagtaccgggtggtgcagccgat
gccgatggacgcttacaggctggcgatcagctattacgtgtcgatggtcaaagcttaata
ggcataacacaagaaagagctgccgattatttggtacgcacaggacctgttgttaccttg
gaagtagctaagcaaggtgcaatctatcatggactggccactttattacaacaacccagt
cctgttatacaacgtggtaatcgtcgcatgtctgaacgtgatctaacacgtatgggaact
gatagtaataagagtatgagtggtggtcctctattaacaaataatcatttacccaatagt
aaatctgtaccagcactacatcatcatacaggcagtggtactatttccatggccaattca
aaatcacgcagtactcatagtttggccaatacgaatcctaatctaaataacaataataac
aacgaacaaggtttctatcaaaatttaagtgtttatcgtaatcaaaatcaatcacaaccc
attttaagcgaaagaccacccatgccatcacattccgcaatgaacgcatacaatggaaat
tcccaacaaaatttacaaaatccaatactctcgccaataaatggtacaaaccaagcaaca
aatctaaaccagcaacaacaggccacttatcaacagcagcagcaacagcaacaacaacat
tcacaacattcattaatgacagcaccacatacatctaatatgccaccaagtcgaccacaa
tcggcctactatcagcatcaagctacaccggctactaacacaacacaacatcaacattta
aatccacaacaacaacaacagcaatttcctcaacacggtcatgccttcagtgctagtaca
acaaatttaagtggtatgcaacaacaacaacaactgcagcaacagttgcaacacatgaca
ccgcagcagcagcaacagtatcagcaacaacaacaaagcttaactttgggcaatcgttcg
aagagtacacaaaatttccaacgtgacatgcaaacacaacaaagtttgcgcatgcaacaa
atgatggctccttcaatgcccaatattaacaacatgtatcaacaacaacagcagcagcag
caacaacagcaacataatacttctctacagcaacataatatgtcaatgccctctagcata
gcagccagtcaaagtatgcaaaatgtttcctctatggcagatgacagccggtattcacaa
tcggctaataattctttaatggaaacaaatggtggctaccaacaacaacaacaatcgccg
gctgggggacaaactcttagaagaaatatgcgtgctgaatatatacaacaacaagcagct
aatggtcagggtggtatggaaagtgctcaacattctcctaattttatgcatgaacagcag
cggggtaattttatgacgctgccacctaaacctgccatgcaacaacaacagcaattaaca
ccacctaaacaacaacaacaattgccacctaccgcccccaagcctatgcaacaaaataga
ttatccctacagcagcagcaacaacaggcatataacaattcgaatttataccagcagcaa
caacaacagcagcctactcaacaaccgggagaggataaacctcctctaccacccaccacc
actcacccattatacaaggccacacaacaaataacacccggtatgaattatgtggccagt
accatagatcctcctaagggaggttacatgccagtttcagcagctgctttacaacaacac
aaaaacatacatggtggtaatccttgggaaagagaagaacgtgaaaaagacttagaaatg
cgcagagaacacattcgccagtggcgtgaacaacaaattaatgaactatcttctttgcca
caaagaacaccacagcaggaggaacaattaaaaactcttatactagaaagagatttcgag
agaagagcccaagaaatggaagagcaagaagatgaaagcgaaccttcctatgagaaggaa
aatgttcaagaagtttttcgtttaaatcaacaacaaaatgtcatacaaactccggtaacc
aattttagacaaaccgaaattaaactagcatcgcttatggacaatcagcgacctggcaac
aataacaattccaacgaaacatcacctttaaattcaaatagaaattcagccgcagaagca
ataccacctccggtaccgacacaaccgccaccacctactactaccacaaccatagtaacc
actaatagcaatacctctaccatacaacctaaatccatattgaaaaataatcgttatgac
ggttccaataccgctccttcttcaccttctaaatctcaaaaatcaacttcatttgccgat
gacaaacatttgcaaacagaacatcctatttcatcgttagctcgtgatatcaatcatctc
tctttaacaaattccaacagctccaacaacaacgcctacgacaacaatatgaattcggaa
aattcacccaattcagcaacagtgccaccacctccaccaccagaacgtaatagttcttac
ttgattatgtctcaacaaaagttacgcaattcttccattggtcttctcaagacagccact
atcaattcggccgatttacagaagaaaacctctgcctcaagtattcttctaaacaataac
aataataatatacaaaataatttattaaatatgaattccgcaaatgcttcactacaatca
tcaccctcttcctctactatggaaatgtataatgcagcagcaacgactgctacacacagt
aacagtgccagtccctcatcatcgatgatgttgttgcgtgacaataaacgagtatcattc
catgatgaagaaaataattatgttgctagtgcattcaataatatggaatataatgtaacg
atggaacagcatatggcaccgagcgatttgaataccattagagaggatacaaatgtaagt
agataa
DBGET
integrated database retrieval system
