Lucilia cuprina (Australian sheep blowfly): 111681096
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Entry
111681096 CDS
T06013
Name
(RefSeq) protein CLP1 homolog
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
lcq
Lucilia cuprina (Australian sheep blowfly)
Pathway
lcq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lcq00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111681096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcq03019
]
111681096
Enzymes [BR:
lcq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
111681096
Messenger RNA biogenesis [BR:
lcq03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
111681096
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
MMR_HSR1
nSTAND3
CbiA
TniB
AAA_10
AAA_16
AAA_18
ATP_bind_1
ATPase_2
Motif
Other DBs
NCBI-GeneID:
111681096
NCBI-ProteinID:
XP_023298588
LinkDB
All DBs
Position
5:complement(46439187..46440962)
Genome browser
AA seq
423 aa
AA seq
DB search
MTEENKNYKEYTLEADSELRFEIEDKHAKVQVTLISGFAEMFGTELVKKKKYDFAVGAKV
AIFTYHGCVLHLTGKTDVSYISKETPMVQYLNCHSALEQLREQAEEKDERGPVAMVVGPM
DVGKSTLCRILLNYAVRLGRRPLYVDTDVGQGALAIPGTIGAILIERPASIEEGLSQTAP
LIYHFGYKTPSGNSTLYKAVISKMADVTLESLNVNKRTKHSGIIINTCGWVKGDGYANLV
HTAQAFEVNAIFVLDQERLYNELLRDMPSFVKVVLLPKSGGVVERSKELRAECRDQRIKE
YFYGSTTPFYPFSIEVKFADLKLYKIGAPPLPDSCMPIGMKAEDNKTKLVAVTPSHSLLH
HILAVSFVESTEEDVIGTNVAGFVCVTGVDMERQAITVLSPQPRPLPNTLLLLSDLQFMD
SHA
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgactgaggaaaataagaactataaagaatatacattggaggctgattccgaattgcgt
tttgaaatcgaagataaacatgctaaagtgcaagtgacgcttatttcaggattcgctgaa
atgttcggtacggaactggtaaagaagaaaaaatatgattttgcggtgggagctaaagta
gccatattcacttatcatggctgtgttttacatttaacgggtaaaacagatgttagctat
atatccaaagagacacccatggtacagtacttgaattgtcattcggctttggagcaattg
cgtgagcaggccgaagaaaaagatgaacgcggtccggtggccatggtagttggccccatg
gatgtgggtaagagtactttatgtcgtatattattaaattatgctgtgcgtctgggtaga
agaccactttatgtggatacggatgtgggccaaggagctctagctatacccggtaccata
ggtgctatattaatagaaaggcccgctagtattgaagaaggtttatcgcaaacggctcct
ttaatatatcattttggttataagactccttccggaaatagcacactctataaggcggtt
ataagcaaaatggcagatgttacattggaatcgttaaatgtaaataaaagaaccaaacat
tcgggtattattataaacacctgcggttgggttaagggagatggttatgcaaatttagtg
catacagcacaggctttcgaagtgaatgccatatttgttttggatcaagaacgtctttac
aatgaattgttgcgtgatatgccttcgtttgttaaggttgttttactgcccaaaagtggc
ggtgtggtagagcgtagtaaagaactacgtgccgaatgtagagatcaacgtattaaggaa
tatttctatggttcaacaacgcccttttatcccttttcgatagaagtaaagtttgcagat
ttaaaactatataaaataggagcaccacctctaccggattcttgtatgcccataggcatg
aaggcagaagataataaaacaaaactggtggctgtaactccatcacattctcttttacat
catatattagcggttagttttgttgagagtaccgaagaggatgtaattggtacaaatgtt
gcaggatttgtgtgtgttacgggagttgatatggaacgacaggcaataaccgttttatca
ccgcagccgcgtcctctacctaataccctattattgctttcggatttgcaatttatggac
agtcatgcctaa
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