Lucilia cuprina (Australian sheep blowfly): 111681567
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Entry
111681567 CDS
T06013
Name
(RefSeq) ATP-dependent RNA helicase p62 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
lcq
Lucilia cuprina (Australian sheep blowfly)
Pathway
lcq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lcq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111681567
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcq03041
]
111681567
03009 Ribosome biogenesis [BR:
lcq03009
]
111681567
Enzymes [BR:
lcq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111681567
Spliceosome [BR:
lcq03041
]
Complex A
U1 snRNP components
U1 related factors
111681567
Complex B
111681567
Ribosome biogenesis [BR:
lcq03009
]
Eukaryotic type
Pre-60S particles
Helicases
111681567
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
P-loop_SecA
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
111681567
NCBI-ProteinID:
XP_023299182
LinkDB
All DBs
Position
4:14292183..14300428
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AA seq
597 aa
AA seq
DB search
MAPHDRTYGGNRGGRDEHGGSGGGNRYGNRGGGGGGNDYHGVRKGRVEKGGRGNDRGGRG
GGFGGGFNDRRGGNGGGNNQDLSIRDMDFTNLAPFKKDFYKEHPIVANRSPYEVQRYRDE
HEITVRGNAPNPIQDFDEAYFPDYCMKEINRQGYKAPTPIQAQGWPIAMSGHNFVGIAKT
GSGKTLGYILPAIVHINNQQPLQRGDGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTC
VFGGAPKGGQMRDLQRGCEIVIATPGRLIDFLAAGATNLKRCTYLVLDEADRMLDMGFEP
QIRKIISQIRPDRQTLMWSATWPKEVKQLAEDFLGDYIQINIGSLELSANHNIRQVVEVC
DENDKEEKLKALLSEIYDTSENPGKIIIFVETKRRVDHLVRFIRSFGVRCGAIHGDKSQS
ERDFVLREFRSGKSNILVATDVAARGLDVDGIKFVINFDYPQSSEDYIHRIGRTGRSNTK
GTSYAFFTRNNAKQSKALVDVLREANQEISPALEGMARNNRFGDGGRSRYGGGGNSRFNG
TFKKGSMGGGNKGYGNNNGGGYGGGRSYGGGSNNEGGYGRGGGSSSGGGNTRHTRFD
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggctcctcatgacagaacttatggtggtaatcgcggtggacgtgatgaacatggaggt
tcaggcggtggtaaccgttacggcaacagaggaggcggcggtggtggtaatgactaccat
ggcgtacgcaagggccgtgttgaaaagggaggtcgtggcaatgatcgtggaggtcgcggt
ggtggcttcggcggcggtttcaatgatcgtcgtggaggcaatggtggtggcaataaccag
gatttgtctatccgcgatatggatttcacaaatttggctcctttcaagaaggacttctac
aaagagcatcccattgttgccaatcgttctccttatgaagtgcaacggtatcgcgatgaa
catgaaattactgtacgcggtaatgcccccaaccccattcaagattttgatgaagcctac
ttccctgattactgcatgaaggaaatcaaccgtcaaggctacaaagctcccacaccaatt
caagcccaaggctggcccattgctatgagtggccacaatttcgttggtattgccaagacc
ggctctggcaaaactttgggttatattttacccgccattgtgcacatcaataaccaacag
cccttgcaaagaggtgatggtcccattgctttagttttggctcccactcgtgaattggca
caacaaatccaacaggttgccactgaatttggctcatcttcgtatgtacgcaatacttgt
gtgtttggcggtgcccctaaaggtggacaaatgcgtgatctgcaacgtggctgcgaaatt
gttattgccactcctggtcgtttgattgatttcttggccgctggcgctacaaatttgaaa
cgttgcacatatttggttttagatgaagccgatcgtatgttggatatgggtttcgaacct
caaattcgtaaaattatttcacaaattcgtcccgaccgtcaaacccttatgtggtctgcc
acctggcccaaagaagtcaaacaattggcagaagattttctcggcgactacatacaaatc
aacattggttcattggaattgtcggccaatcacaatattcgtcaggttgtcgaagtttgc
gatgaaaatgacaaagaagaaaaacttaaagctctgctttcagaaatttatgataccagc
gaaaatcctggcaaaattattattttcgttgaaactaaacgccgtgtcgatcatttagta
cgttttatccgtagtttcggtgtacgctgtggcgctattcatggcgacaagtcacaatct
gaacgtgattttgttttacgtgaattccgctctggcaaatccaacattttagttgctact
gatgtagctgctcgtggtttagatgttgatggcattaagtttgtaatcaattttgattat
ccacaatcttcggaggactatattcatcgtattggtcgtactggtcgttcaaatacaaag
ggcacatcatatgcattctttacacgcaataatgctaaacaatccaaagctttagttgat
gttttaagagaggctaatcaggaaatcagtcctgctttagaaggtatggcacgcaataac
cgctttggcgatggtggtcgttcacgttacggcggtggcggcaattctcgtttcaatggc
accttcaaaaagggttcaatgggcggaggcaacaaaggctatggcaacaataacggtggc
ggttatggtggtggccgcagttacggcggtggtagcaataatgaaggaggctacggacgc
ggtggcggcagtagtagtggcggtggtaataccagacatacgcgttttgattaa
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