Lucilia cuprina (Australian sheep blowfly): 111682278
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Entry
111682278 CDS
T06013
Name
(RefSeq) protein suppressor of forked isoform X1
KO
K14408
cleavage stimulation factor subunit 3
Organism
lcq
Lucilia cuprina (Australian sheep blowfly)
Pathway
lcq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lcq00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111682278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcq03019
]
111682278
Messenger RNA biogenesis [BR:
lcq03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
111682278
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
NRDE-2
Elongin_A
Motif
Other DBs
NCBI-GeneID:
111682278
NCBI-ProteinID:
XP_023299955
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Position
3:complement(5291985..5297401)
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AA seq
730 aa
AA seq
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MSVRDQIKIDIEWGHERLVRAQQVVEMRPYDIESWSTLLREAQTRPVNEVRTLYESLVNV
FPTTARYWKIYIEQEMKGRNFEKVEKLFQRSLVKILNIDLWKLYLTYVKETKAGLSTHKE
KLAQAYDFALEKIGMDLHSFSIWQDYISFLRSVEAVGSYAENQKITAVRRVYQKAVITPI
VGIEILWKDYIAFEHNINPIISEKMSLERSKDYMNARRVAKELENITKGLNRNLPAIPPT
LAKEEVKQVELWKKFIAFEKSNPLRTEDTALITRRVMFATEQCLLVLTHHPAVWHQAAQF
LDQSSKALADKGDTQAAKIFGDECANILERSINGVLNKNSLLYFAYADFEEGRMKYDKVH
AMYNKFLSIPDIDPTLAYVQYMKFARRAEGIKSARAIFKKAREDIRSRYHVFVAAALMEY
YCSKDKDIAFRIFELGLKRFGGSPEYVMCYIDYLSHLNEDNNTRVLFERVLSSGGLTPQL
SVNVWNRFLEFESNIGDLSSIVKVERRRSAVLENLKEYEGKETAQLVDRYKFLDLYPCTT
VELRSIGYTENVGITTNKLAAGPGNAAAAAIKEEPESEPAVQLPKPDFGQYIPFKPKANA
YPGAHPLAGGTFPQPPALAALCASLPPPLCFRGPFVSIEMLFDIFNRIKLTDAAPLPSGD
PGCDIKIFDLAKSVHWIVDESSLTGDTSGGSGVKRRRMLPGGDDSDEETPTPAPPANDIY
RLRQQKRFSK
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtaagagatcaaataaaaattgatattgaatggggtcatgaacgtttggtgcgc
gcccagcaggtggtggaaatgcgtccttatgatatagaatcttggtcgactttgttgcgt
gaggctcagacacgaccggtcaatgaggtgcgcactttatatgaatctttggttaatgta
tttcccaccactgcacgttattggaagatttacatagagcaagaaatgaaaggacgcaat
tttgagaaagtggaaaagttgtttcagcgttctttggtgaagattttaaatatagattta
tggaaattatacttgacctatgttaaggaaactaaggcgggtttaagtacgcacaaagaa
aaactggctcaggcttatgattttgctttggaaaaaattggaatggatttacattctttt
tcgatatggcaggattatatttcatttttgcgcagtgtagaggcagtgggcagttatgcg
gaaaatcaaaaaatcactgctgtacgcagagtctatcaaaaagcggttattactcccatt
gtaggcatagaaatattatggaaagattatatagcctttgagcataacattaatcccatt
atatcagagaaaatgagcttggaaagatcaaaggattacatgaatgcacgaagagtggcc
aaggaattggagaatattaccaagggtttgaatcgtaatttacccgctataccacccact
ttagccaaagaggaagttaaacaggttgaattatggaaaaaatttattgcttttgaaaaa
tccaatccactaagaaccgaggatactgccctcattacaagacgtgttatgtttgccact
gaacaatgtttgctagtgttaacacaccatccggctgtttggcatcaagcagcacaattt
ttagatcaaagttctaaagctttggcagataaaggcgatacccaagcggctaaaatcttt
ggcgatgaatgtgccaatatcttggaacgttcaattaatggtgttttaaataagaattct
ttgttgtattttgcttatgctgattttgaggaaggacgcatgaaatatgataaagtacat
gctatgtataataagtttttatccataccggatatagatccaacattggcctacgtccaa
tatatgaaatttgcccgccgtgctgaaggcatcaaatctgcccgtgctattttcaaaaag
gcccgtgaggacatacgttctcgttatcatgtctttgtggcggctgcccttatggaatac
tactgttcgaaagataaagatattgcctttcgtatattcgaattgggtttaaaacgtttt
ggtggtagcccggaatatgtcatgtgttatatagactatttatcgcatctgaatgaagat
aacaataccagagtgttgtttgaacgggtcttatcatcgggtggtctaacgccacaattg
agtgttaatgtttggaatagatttttggaatttgaatcgaatattggtgacctatcgagt
attgtaaaggtggagagacgaagaagtgctgtattggaaaatcttaaagaatatgagggt
aaggaaactgcacaattggtggatcgttataagtttttggatttatatccctgtacaaca
gtggaattaagatctataggttatacagagaacgtgggtattaccaccaataaactggct
gcgggtcccggtaatgcagcagcggctgccattaaagaagaaccagaatctgaaccggct
gtgcaactgccaaagccagattttggccaatacatacctttcaagcccaaggcaaatgca
tatcctggcgcacatcccctggcgggtggcacttttccccaaccacctgccttggcggct
ttgtgtgcttctttgccacctcctttgtgctttagagggccatttgtttccattgaaatg
ttgttcgacatatttaatcgcattaaattaacagatgctgctcccttaccctccggcgat
cctggttgcgatattaaaatctttgatttagccaaatctgttcactggatcgttgacgaa
agctctttaacgggtgacacttcaggcggatcgggagttaaacgtcgacgcatgctgccc
ggcggtgatgacagtgatgaagaaacacccactcctgcaccaccagcaaatgatatctat
cgtctgagacaacaaaaacgtttttccaaatga
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