Lucilia cuprina (Australian sheep blowfly): 111682655
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Entry
111682655 CDS
T06013
Name
(RefSeq) exosome complex component MTR3
KO
K12587
exosome complex component MTR3
Organism
lcq
Lucilia cuprina (Australian sheep blowfly)
Pathway
lcq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lcq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111682655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcq03019
]
111682655
Messenger RNA biogenesis [BR:
lcq03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
111682655
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
ATP-synt_F6
COG2_C
Motif
Other DBs
NCBI-GeneID:
111682655
NCBI-ProteinID:
XP_023300414
LinkDB
All DBs
Position
5:15031318..15032569
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AA seq
286 aa
AA seq
DB search
MSYSLGNESQIKFGIYKVKENPQELFDRLSKPKTLELEPRPTFLKVGAVSNVKGSAYMEY
GNTKVMAQVEPPKEISKNNRCGTLGVVICSVKYAPFINMDSEVIARKESFMSVALKKALE
PVICRHEFANFQLEIKVLIIDDDGCALSTAINCCGAALIEGGIPTYDLITASTVCLLKQQ
EFINPTADVEDLLLALSACEDKDDATVEEQGIVVTASLSAVGQVSECFQKGYVLPETLER
LCDHSLAINQRMLDTIRHVLVNKVKKYIAVQQSADEEVEMNDTANK
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgtcttattccctgggaaatgaatcacagatcaaatttggcatttataaagtcaaagaa
aatccacaagaattatttgatagattgtctaaaccaaagactttggaactggaacccaga
cctacatttttaaaagtgggagcagtgtcaaatgttaagggttctgcctatatggaatat
ggcaatactaaggtaatggcccaagtggaaccacctaaagaaataagcaagaataataga
tgtggcaccctgggggtagttatttgcagtgtcaaatatgctccatttatcaatatggac
agtgaggtaatagcacgcaaagaaagttttatgagtgtggctttaaagaaggctttggag
ccggtaatatgtcgtcatgaatttgccaattttcaattggaaataaaagttttaatcata
gatgatgatggttgtgccttaagtacggccattaattgctgtggtgctgctctaattgag
ggaggcataccaacctatgatctaataaccgcctcaacagtgtgcctgctaaagcagcag
gaatttattaatcctactgctgatgtggaagatttactgttggctctttccgcttgcgag
gataaagatgacgctacagttgaagagcagggcatagtggttactgctagtctgtcggct
gtgggacaagtttcagaatgctttcaaaagggctatgttctgcccgaaactttagaacgt
ttgtgtgatcattcactggccattaatcaaagaatgctggacactatacgacatgttttg
gttaacaaagttaagaaatatattgctgtccagcaaagtgctgatgaagaagtagaaatg
aacgatactgccaataaatga
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