KEGG   Lucilia cuprina (Australian sheep blowfly): 111682658
Entry
111682658         CDS       T06013                                 
Name
(RefSeq) RNA polymerase II elongation factor Ell
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
lcq  Lucilia cuprina (Australian sheep blowfly)
Pathway
lcq03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:lcq00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    111682658
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:lcq01009]
    111682658
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lcq03021]
    111682658
Protein phosphatases and associated proteins [BR:lcq01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     111682658
Transcription machinery [BR:lcq03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     111682658
    Little elongation complex (LEC)
     111682658
SSDB
Motif
Pfam: ELL Occludin_ELL
Other DBs
NCBI-GeneID: 111682658
NCBI-ProteinID: XP_023300417
LinkDB
Position
5:15062556..15077844
AA seq 1347 aa
MTNSIASAKCPSILTSGKYGMSQRHSIIDDSKEYIFVKFTDSAFRAIEEYQRNAQSKRLP
KGQCAKIQFSGNTGVIQFPPTADASTTNGSADGRKFGFAIDDVEGSLECIQQSGADLDVL
GSLSYRMRIHANDDVYDTTRTKMAIAEETEKSKCIREIKPNQKDIGRKVKRPVSAASIQA
YTNGTTSNSSSSLLNGLSNGNSSNSISSSINGSSSYLSNSSNNHINSSSSNSNSRNKLSA
STLNQHSPPSGGAGGGGGGGGVGVGVNGSRLLTNASSLRSSPNPSLIGGSGTVGSGNGNS
STNRYGSPSNLPSSNLPSLSTNMTNGIGGYSPPGSATNINHMSSSLHPQAKKANMGNGVN
SRGNGSAAAGGTAAKGSVGTNGKVNGLSNGKTLDVSRRKIRERLIHLLALKPFKKPELYS
RLTNEGLAQRERQLISTILKDISTLSRDNTYNLKRSMWNDVDENWPFFSEQEIQQLKRRK
PQNLTPPMSSDAGSSTSGQSPTSSTHTGSPPPLVATANMNGGVGGGGMKRTSLEPDLYDG
ALTLGMQSKKQRISHYKKDGTSSSSSNGSSLINSSNMGAGARMGMGGGSSGGGGGGSAYN
QNHRSSSAAYSPHNYNTGNTNNGNDENSGNSDLTFNVLNNMDEFIQHTAVVGGDSTFAGR
SKTTAANSSKISPSISSSNSNNNSSSTSSTNAKEKRNSGGSSSSSSGYGSNRESSSTSST
SSTASSNSSAAMRRKNSPTPYANNFVPETKISSNSNGSSSNSRLNKQQQQRQQQQQQQSS
PSYTNNNNNNINNHHLHKASNSSNSVISSMNEDYSPPIINHNTNTSSSRSRHQSTSSGTT
TTTNGRKGESSSTSSSGKHSRSSTPTQKHFNKHHSSNSSKNNSATTNIQQQLHNNCTNNN
NHHKTLQQQQEDQQALYNAARTPPQTASHSSQQREQQEHSSPTQQIAAAASTFSLTNHST
SSGDAPRYDFSSYTPITSIEQRRKYKTEFESDYDEYRKLLAQIESVGHRFRQLADRLSRV
QQGCIDYYNIKEQIVSEYNRIRQEEAINRDKQRFDYLHEKLAHIKQLVMDYDKKLTSGLA
APTTNTTSTNQQQQQQQPETLNQQQQTTVTNTSAHLSPMLQSSGESNHSPPLVIMNPTTV
NGGGGGSAAVNSKSSSSSSSHGKKSSKHHQKNNHQQQQQHMQLQQQEHYQQHHEPETIQM
DDEDDDDDDDDEEETSMQYHQHNSYNGNGGGGVVVGNNHLNHPQHVTNPATLTHSSKRKH
QQQQHELQQQQQQQQHYQPITSTESQQQNHNHNNNNNDSDSDSDSSSSSSSNDDDNSDDD
NSDASEDDDDDNSDDDDDSNDDDNDNQ
NT seq 4044 nt   +upstreamnt  +downstreamnt
atgacaaattcgattgcgtctgcaaaatgcccgtctatcctaacgtccggcaaatatggt
atgtcacagcgtcacagcattatcgatgattccaaagagtatatttttgttaaatttact
gattcggcatttcgtgcaattgaggaatatcagcgtaacgctcaatcgaaacgtttacca
aaaggacaatgcgccaaaatacaattttctggaaatactggcgttatacaatttccaccc
acagctgatgcttcaacgaccaacggatcagccgatggacgtaagttcggttttgccatc
gatgatgttgagggctcgctggaatgtatacaacagtcgggagccgatttggatgtattg
ggatctcttagttatcgtatgcgcattcatgccaatgatgatgtctacgatacgacaaga
acaaaaatggccattgccgaggagacggagaagagtaagtgtatacgtgagattaaacct
aatcagaaagacattggacgaaaggtgaaaaggcccgtctcggctgcttctatacaggcc
tatacgaatggtacgacatcaaactcgtcgtcatcacttttaaatggtcttagtaatggt
aatagcagcaacagcattagtagtagcattaatggcagcagtagttatttaagtaatagc
agcaacaaccacatcaacagcagcagtagtaatagtaatagtcgtaataaattatcagca
tcaacgctcaatcaacactcaccgccatcaggtggtgctggcggtggtggcggcggcgga
ggggttggagtgggtgttaacggttcacgtttgttaacaaatgcctcctctctacgctct
tcccccaatccgtctctaataggtggcagtggtaccgtaggcagtggcaatggcaatagt
agtactaatcgctatggcagtccttcaaatcttccctcttccaacttaccctcgctgtct
acaaatatgacaaatggcattggtggttattccccaccgggatctgccactaacatcaat
catatgtcgtcttcgctgcatccgcaggccaagaaagcgaatatgggtaacggtgtaaac
agcagaggcaatggctcagcagccgcaggaggcactgccgctaaaggttctgtcggcact
aatggcaaagtgaatggactctcgaatggcaaaactcttgatgtctcaagaaggaaaatc
cgcgaacgtctgatacacttgttagctttgaagcctttcaaaaaacccgaactctattca
aggttaacgaatgagggtttggctcaacgggagcgacaactgatcagtacgatactcaaa
gacatatcgacactgtcgcgcgacaatacctacaacctgaaacgtagcatgtggaatgat
gttgatgaaaattggccatttttctcggaacaagagatccaacaattgaaaagacgtaag
cctcagaatctaacaccacctatgagctcagatgccggtagttcaacgtcgggtcaaagt
ccgacttcatctacacatacggggagcccgcctccattggtggcaacagccaatatgaat
ggaggtgtaggtggtggcggcatgaaacgaactagtctagagccagatttatatgatggg
gccttaaccttgggtatgcaatcgaaaaaacaacgtataagccattacaaaaaggatgga
actagcagtagtagtagtaatggtagtagtttaataaatagcagcaatatgggcgctggc
gcaagaatgggtatgggaggaggaagtagtggcggcggtggtggtggttctgcatataat
caaaatcatcgatcctcatctgcagcttactctccccacaactacaatacaggcaataca
aataatggcaacgacgagaattctggaaattctgatttaacatttaatgtgctcaataat
atggatgagtttatacagcatacggctgtggtgggaggcgattcgacatttgccggacgt
agtaaaactacagcggctaatagtagtaagatatcaccatcaattagcagcagtaatagt
aataacaacagtagttcaacgtcctcaacgaatgctaaagaaaaacgtaactctggcgga
agtagtagttcatccagtggttacggcagtaatcgtgaatcttcgtcaacgtcatccaca
tcatccacagcgtcatcaaactcctctgctgccatgcgacgtaaaaattccccaacgcca
tatgctaataattttgtgcctgaaactaaaatttcttcaaactccaacggtagcagcagc
aatagtaggttgaacaaacagcaacagcaaagacaacaacaacaacaacagcagtcatct
cctagctacacaaacaacaacaataataacattaataatcatcaccttcataaagcaagc
aacagcagtaatagtgtcatatccagcatgaatgaagactattcaccaccaataataaac
cacaatacaaatacatcatctagccgttcacggcaccaatcaacctcatccggaacaaca
acaacaacaaatggtcgtaaaggtgaatcttcatcgacgtcgtcgtcgggtaaacattca
agatcttcaacgccgactcaaaagcattttaacaaacatcatagtagtaacagcagtaaa
aataattccgctacgactaatattcagcaacagctgcataataattgtactaataataac
aatcatcataaaacactgcaacagcaacaggaagatcagcaagcgctgtacaatgctgct
cgaacaccgccccaaactgcctcgcattcttcgcaacaaagagaacaacaggaacactct
tcgcccacacaacaaattgccgccgctgcctcgacattttcgttaaccaaccactccaca
tcatcgggagacgcacctcgctatgattttagcagttacacgcccataaccagcatcgaa
cagaggcgcaaatacaagactgaatttgagagtgactacgatgagtatcgtaaacttttg
gcacaaatcgaaagtgttggacatcggtttcgtcaattggccgatcgtttaagtcgtgta
caacagggttgtatcgattactataacattaaggaacaaattgtttccgaatacaatcgc
atacgccaagaagaggccataaatcgcgataaacagagatttgattatttgcacgaaaaa
ttggcacacattaaacagttagttatggattatgataagaaattgaccagtggtctggcg
gcgcctacaacaaacacaacatccactaatcaacaacaacagcaacaacaaccagagaca
ctaaaccaacagcaacaaactacagttacaaatacatcagctcatctatctccaatgcta
caaagcagtggtgagagcaatcattcaccaccgttggtgataatgaatcctacaactgtt
aatggtggtggtggtggtagtgcggctgtaaattctaagagttcttcgtcatcatcttcc
catggcaaaaagagttcaaaacatcatcagaaaaataatcatcaacagcagcagcaacat
atgcaactgcagcaacaagaacattatcaacaacaccatgaacctgaaacgatacaaatg
gatgatgaggacgacgatgatgatgatgatgatgaagaagaaacatcaatgcaatatcat
caacataactcctacaatggtaatggtggaggtggtgttgttgttggcaataatcattta
aatcacccacaacatgttacaaatcctgcaactttaacacattctagtaaaagaaaacat
caacaacaacaacatgaactgcagcagcaacaacaacaacaacaacactatcagccaata
acatcaacagaatcacagcaacaaaatcacaatcataataataataataatgattccgat
tcagatagtgattcaagctcatcatcttcatccaacgatgatgacaactcagatgatgat
aattcggatgcctctgaagatgatgatgatgataactccgatgatgatgatgattccaac
gatgatgataatgataaccaatga

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