Lucilia cuprina (Australian sheep blowfly): 111683282
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Entry
111683282 CDS
T06013
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
lcq
Lucilia cuprina (Australian sheep blowfly)
Brite
KEGG Orthology (KO) [BR:
lcq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lcq03009
]
111683282
Enzymes [BR:
lcq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111683282
Ribosome biogenesis [BR:
lcq03009
]
Eukaryotic type
Pre-60S particles
Helicases
111683282
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RPT
AAA_30
Helicase_RecD
AAA_19
AAA_22
Motif
Other DBs
NCBI-GeneID:
111683282
NCBI-ProteinID:
XP_023301097
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All DBs
Position
3:36093508..36095859
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AA seq
545 aa
AA seq
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MATKRQIKQFHEMELDDRILKAISKLGWTEPTLIQEAAIPLLLEGKDVIVKARTGSGKTA
AFALPLIQKILNSKMNADEQCTSALVLAPSKELCQQTRNAMEQMSEKCGKVLRIVDLSSS
DVVAQRHLLSERPDVIITTPAKVLSHLQSGAMDLKRLETLVVDEADLVFSFGFEKDFKKL
VEYLPAIYQAVLVSATITDDVMNMKSVILNNPVILKLEEPELVPESQLSHQRILAEENDK
PAILYALLKLRLIRGKNVIFVNTVDRCYKLKLFLEQFSIKSCVLNSELPAKIRIHTINQF
NQGIYDFIIASDEHMLENPGRNKSDRESGASRGIDFHCVSNVINFDFPQSVSSYIHRAGR
TARGNNKGTVLSFVSIKDAKINDAVEERLKEGYMSDEQVIKNYQFKMEEVEPFRYRARDA
WRAVTRIAVHEARVKEIKIEIFNSEKLKGFFNENTRDLQVLRHDKPLKTVKVQPHLSQVP
EYIVPKALKRIATTTTSSSSNKTPRYFQSSAKAAYENQASNPLLVSEVDFGKKSGGRGGK
RHKKK
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggccactaaacgacaaattaaacaattccatgaaatggaattagatgatcgtatactt
aaggccatttcaaaattaggctggacagaacccactttaatacaagaagctgctatacct
ttgctactagaaggtaaagatgtcattgtaaaggctagaacgggttccggcaaaacagca
gcctttgctttgcctttaatacaaaaaattctcaattccaaaatgaatgccgacgaacag
tgtaccagtgctttggttttggcacctagtaaagaactttgccaacaaacacgcaatgcc
atggaacaaatgagtgaaaaatgtggtaaagtattgcgtatagtagatctttcctctagt
gatgtggtggctcaaaggcatttgttgtccgaaagacctgatgttattatcactaccccc
gctaaggtcttatcacatttacaatctggtgccatggatctaaaacgtttagaaactttg
gtagtcgatgaagcagatttggtattttcttttggttttgaaaaggatttcaagaaatta
gtcgaatatttgcctgccatttatcaggctgttttggtgtcggccaccattaccgatgat
gtgatgaatatgaagagtgttattctaaataatccggttatattgaaattggaagaacct
gaattggtaccagagagtcagctatcgcatcagcgtattttagccgaagagaatgataaa
ccggctattttgtatgcattgttgaagttgcgcttgatacgtggtaaaaatgtgattttt
gtcaataccgtggatcgttgttataaattgaaattgttcctcgaacagttcagcattaaa
tcctgtgtcttaaactctgaattaccggcaaaaattcgcatccatactataaatcaattt
aatcagggcatttatgatttcattattgcttccgatgagcatatgttggaaaatcctggt
cgcaataagtcagatcgtgaatcgggtgcctctagaggcatagattttcattgtgtatcg
aatgttataaatttcgattttccacaaagtgttagttcgtatatacatcgtgcgggtcgt
acagcaagaggtaataacaagggtaccgtattatcttttgttagtatcaaggatgctaaa
atcaatgatgctgtagaagaacgtcttaaggagggttatatgagtgatgaacaagttatc
aaaaactatcaattcaaaatggaagaagttgaacccttccgctatcgcgcccgtgatgcc
tggcgtgctgtcactcgtattgctgtccatgaggctcgtgtaaaagaaatcaaaatcgaa
attttcaatagtgaaaaacttaagggtttctttaatgaaaatactcgtgatttgcaagtt
ttacgtcatgacaaaccattgaagacggtcaaagtacaaccacatttatcacaagttcct
gagtatattgtacccaaagccttaaaacgtatagccactacaacgacttcatcaagttca
aataagacgccacgttatttccaatcctcagctaaggccgcctatgaaaatcaagctagt
aatcctttattggttagtgaagtagattttggtaaaaagtccggaggcagaggtggaaaa
cgtcataagaagaagtaa
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