Lucilia cuprina (Australian sheep blowfly): 111683365
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Entry
111683365 CDS
T06013
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
lcq
Lucilia cuprina (Australian sheep blowfly)
Pathway
lcq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lcq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111683365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcq03019
]
111683365
Messenger RNA biogenesis [BR:
lcq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111683365
mRNA degradation factors
3'-5' decay
Pan complex
111683365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
DUF4797
Pkinase
Motif
Other DBs
NCBI-GeneID:
111683365
NCBI-ProteinID:
XP_046807115
LinkDB
All DBs
Position
5:44430649..44476089
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AA seq
748 aa
AA seq
DB search
MSTFLNNFFPADTAAMDPIFYSPSNGIPSESKLATYMNRQNVATPTYGINAGFSLLNMDS
PLSIKKSQVTPQSPEFIPTRISSSPNFYSPYHTPMLNGVTSVGNNVVNGLTPTSTAAKSV
NGTPSMLGLQKATAAAVAQQKQLQQQKHNSHVNGGTKQIGQTSANQGGYVGMTTTPLKGG
RNSLLRNESPSSIGEKSPPRMTPHASPIPTTLPANVHQENVGGTIYFYPTANHTTSQNSN
TVGVPSGVVDPTSAHHAGPTGVGVGVMAPITPVQPSLMYTGHVYPGPASNVITMQPKTQL
ESAFFLPDEMRAEILSRNVISNLMLDASEAAQHALPMEIDNYHTLYPLEALPVQPLHAKL
TLPSSTYKATHSTTGIKYCLRRLHGFRLQSTKCMSVVEMWKKLQHSNVVQLREVFTTKAF
GDNSLVLVYDYHPNSHTLLAKYFTPTPDSNGYNDPFQGEARPFSHKSNLQRSSNGPLLPE
ATIWSIIMQLTAGLRAIHQAGLACKVLDPTKIIVTGKRVRFSFCGTSDIAQFDPNAANPL
AVVSMHQQEDLTALGRLVLALACRCLQSVQRDNVQSSIEMVSRHYSSDLRNFIVYLFTTT
QRRSVTDLMPMIGARFYTQLDALQAQCDMQEDELAKEMENGRLYRILVKLNCINERPDFN
LDCTWSEIGDRYMLKLFRDYLFHSVTEDGRPWLDHAHIVQCLNKLDAGSLERVQLMSRDE
QSVLIVTYAELKNCLEKAFSELMANAAT
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgttcttaaataatttcttcccagcagatacggctgctatggatccaattttt
tactccccatcaaatggcataccttctgaaagtaaactagcaacttatatgaatcgacaa
aatgttgcaacaccaacttacggtataaatgcgggattttctttacttaatatggactca
ccattgtcgattaagaagtctcaggtaacaccacaatcgcccgaattcattccaactcgt
atcagttcatcacccaatttctattcgccatatcatactccaatgttaaatggtgtaacg
tctgttggtaataacgtagttaatggtctaacgcccacaagtacagcagctaaatcggtt
aatggtacaccctctatgttgggtctgcagaaagcaacagccgctgccgtggcacaacaa
aagcaattacaacaacaaaaacataatagccacgttaacggcggcactaaacaaatcgga
caaacgagtgccaatcaaggaggatacgtaggcatgacaacgacaccattaaaaggtgga
cgcaatagtttgctgcgcaacgaatcaccctcgagtataggtgagaaatcaccgccacgt
atgacaccgcacgcatcgcccatacccaccacattaccagccaatgtacatcaggaaaat
gttggcggcaccatttacttttatccaactgccaatcatacgaccagccagaatagcaac
accgtcggtgtacccagcggcgttgtcgatccaacgtccgcccatcatgccggtcccaca
ggtgtgggcgtgggtgttatggcacccataacacccgtccaaccatcgctcatgtatacg
ggtcatgtgtatccgggtcctgcctcaaatgtcataacaatgcaaccgaaaacacaactg
gaatcggcattctttttacccgacgaaatgcgcgctgaaattttgtcgcgtaatgtgatc
tcgaatttaatgttagatgccagcgaagcagcacaacacgccctaccaatggaaattgat
aattatcatacgttgtatccgttggaagcgttacccgtacagccgttgcacgccaagtta
actctgccctcttccacctataaggcaacacacagtacaactggtatcaagtattgtctg
agaaggttacatggtttccgtttacagtcgacaaaatgtatgtcagtcgttgaaatgtgg
aaaaagttgcaacattcaaatgtggtacaattacgtgaagtcttcacaacaaaagcattt
ggtgataattcattagtattagtttacgactatcatccaaactcacatacattattagcg
aaatattttacaccaacgccagatagcaatggctataatgatccattccagggcgaggca
cgccccttcagtcataagagcaatttacaacgttcaagcaatggtcctcttttacccgag
gcaacaatttggtcaataattatgcaattaacagctggtttacgtgcaattcatcaagct
ggtttagcctgcaaagttttagatccaacaaaaataattgtaaccggtaaacgtgtacgt
tttagtttttgtggcacaagtgatatcgcacagtttgatccaaatgctgcaaatccttta
gctgttgttagtatgcatcaacaggaggatttgacagcattgggtcgtttagtattagca
ttggcttgcagatgtttacagtcggtacagcgtgataatgtacaatcaagcattgaaatg
gtctcacgtcattactcctccgatttgagaaattttattgtttacttatttacaacgaca
caacgacgttcggtgactgatttaatgccaatgattggtgcacgtttttatacacaattg
gatgccttgcaagcacaatgtgatatgcaagaggatgaacttgctaaagaaatggaaaat
ggacgtctttatagaatattggtgaaattaaattgtattaacgagaggccagactttaat
ttggattgtacttggtctgaaattggtgatagatatatgttaaaattattccgtgattat
ttatttcattccgtcactgaggatggtcgaccatggttggatcacgcacatattgtacaa
tgtttaaataaattagatgctggctcattagaaagagttcaactaatgtcacgcgatgag
caatcggttcttattgttacttatgctgagctcaagaattgcctggaaaaagcattttcc
gaattgatggccaatgctgccacataa
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