Lucilia cuprina (Australian sheep blowfly): 111683442
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Entry
111683442 CDS
T06013
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
lcq
Lucilia cuprina (Australian sheep blowfly)
Pathway
lcq03022
Basal transcription factors
lcq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lcq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111683442
09124 Replication and repair
03420 Nucleotide excision repair
111683442
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcq03021
]
111683442
03400 DNA repair and recombination proteins [BR:
lcq03400
]
111683442
Transcription machinery [BR:
lcq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
111683442
DNA repair and recombination proteins [BR:
lcq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
111683442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
FKBP26_C
Motif
Other DBs
NCBI-GeneID:
111683442
NCBI-ProteinID:
XP_023301280
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Position
6:52005707..52008733
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AA seq
585 aa
AA seq
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MTTSSEDVLLQMGEVRYKKGDGTLYVMNERLAWMAENRDTVAVSHRFADIKTQKISPEGK
PKVQLQVVLHDGNTSTFHFVNRNGQQAMLADRDKVKELLQQLLPNFKRKVDKELEEKNRI
LSENPHLFQLYKDLVTSQVLTSDEFWNTHAKEHALKKVNKKQSIGVSGAFLADIKPQTDG
CNGLKYNLTDDIIHCIFKTYPAVKRKHQENVPAKLSEAEFWTKFFQSHYFHRDRITAGTK
DIFAECGKIDDQTLKAAVQQGAGDPLLDLKQFEDVPLEDGFCSVAGDRNTVNSGNIVHQN
MIKRFNQHSIMVLKTCADVNAASSGAATGPLNNQAKDSKTENGSVEKSKNKEVTQNGGGT
STLNSPEKPSKRQKIMEKIHYEDLGEPQVDPDGSLNSEAKKKSQQITLSKVERYLHGPMP
STGYEMHEDRRRMEEIQYQLLRSTENWNQRVPHKVLVSSTAAVNALGELSPGGALMRGFQ
EQSVGQLVPPDFEKDLRNLYLALSELLKHFWHCFPPTTQDLETKALKMHEALQRFKMAKL
QPFEDRCLQKLSPLGGTLTQHLNRLLQSANTKFVTWQERKMRQHK
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccagtagtgaggatgttttgttgcaaatgggagaagtacgttataaaaagggt
gatggcacgctgtacgtaatgaacgaacgtttagcgtggatggcagaaaatcgtgacaca
gtggcggtgtcccatagatttgctgatatcaagacacaaaaaatctctcctgaaggcaaa
cctaaagtacaattgcaagttgttcttcacgacggcaacacttccacattccattttgtc
aatcgtaatggccagcaggccatgttggccgatcgagataaagttaaagagttactgcaa
caattactgccaaatttcaaacgaaaagttgacaaagaattggaagaaaaaaatcgcata
ttatcggaaaatcctcatctgtttcaattgtataaagatctggtgacttcacaggttttg
accagtgatgaattttggaatacacatgctaaggaacatgctttaaagaaagttaataaa
aagcaaagtataggtgtttctggtgcctttttagccgacataaaaccacagactgatggc
tgtaatggtctcaaatataatctcaccgatgatattatccattgtattttcaaaacatat
cctgccgttaagcgtaaacatcaagaaaacgttcctgccaaattgagtgaggctgaattt
tggacgaaattctttcagtctcattacttccatcgtgatcgtataacggcagggacaaag
gatatttttgcagaatgtggtaaaattgatgatcaaacattgaaagctgctgtgcagcaa
ggggctggcgatcctctacttgatcttaaacaatttgaagatgttcctttagaagatggt
ttctgtagtgtggctggtgatcgtaataccgtgaatagtggtaatatagtacatcaaaat
atgattaaacgtttcaaccagcattcgataatggtcttaaagacatgtgcagatgttaat
gctgcctctagtggagcagcaacgggtcctctaaataatcaagcaaaagatagtaaaaca
gaaaatggttcggtggagaaatcaaaaaataaagaagttacacaaaatggtggtggcact
agtacattgaatagtcccgaaaaaccttcgaaacgtcaaaaaattatggagaaaatacat
tatgaagatttgggtgaaccacaagttgatcctgatggcagcttaaactcagaagctaaa
aagaaatcacaacaaattactctctcaaaagtggaacgttatttacatggacccatgcct
agtactggttacgaaatgcatgaggatcgcagacgtatggaagagatacaatatcaattg
ttaagatctacagaaaattggaatcaacgagtacctcataaagtattagtaagctcaacg
gcagcggtaaatgccttgggtgaactaagtcccggtggagccctaatgagaggttttcaa
gaacagtctgtaggacaacttgtacctccggattttgaaaaagatttacgtaatttatat
ttagctttgtctgaattattaaaacatttttggcactgctttccacccactactcaggac
ttagaaactaaagctttaaaaatgcacgaagctttgcaacgttttaaaatggctaaatta
caaccctttgaggatcgctgtttacaaaaactctctcctttgggtggcactttaacccaa
catttaaaccgtttattacaatcagccaatactaaatttgttacttggcaagagcgcaaa
atgcgccagcataaatag
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