Lucilia cuprina (Australian sheep blowfly): 111684368
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Entry
111684368 CDS
T06013
Name
(RefSeq) collagen alpha-2(I) chain-like
KO
K19719
collagen type II alpha
Organism
lcq
Lucilia cuprina (Australian sheep blowfly)
Pathway
lcq04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lcq00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111684368
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lcq00536
]
111684368
Glycosaminoglycan binding proteins [BR:
lcq00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111684368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COLFI
Collagen
Motif
Other DBs
NCBI-GeneID:
111684368
NCBI-ProteinID:
XP_046811584
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All DBs
Position
6:7598817..7601034
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AA seq
343 aa
AA seq
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MPGAPGLKGDTGLPGVPGAPGKPGEMGMRGPQGRDGNPGPAGQAGPPGPRGYNGNDGKPG
PMGPAGPPGPPGPPGETLGYDVAALTALLNQGQTKGVDVLGDQPMLDQLGEGLTDEEKHA
LVLKAYEHVKASFIRLTRPNGQQSAPAKTCRDLFAAYPEYNSGEYWIDPNEGDPQDAILV
YCEKERRATCIRPQPKQTKVISYKGKEEEEAWLSELPSGMKIHYKTDSYQMGFLQLMSAK
ASQQITFHCKNTVAYKDEKKDTLRNGLKLLSWNDAELTPDGPQRLRYEADEDGCRKRSNN
WDKSVLTYTTDKSQRLPIVDIAVRDIGNANQEFRIELGAACFY
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgcctggtgcaccaggtctaaagggtgatactggtcttcccggagtaccaggagctcca
ggaaaacccggcgaaatgggtatgagaggtccccagggaagagatggaaatccaggacca
gcagggcaagcaggaccaccgggccccagaggttataacggaaatgatggcaaaccaggt
ccaatgggtccagctggtcctccaggaccaccaggcccacccggtgaaactttgggttat
gatgtagcagccctaacagccttactcaatcaaggacaaaccaagggtgtagatgtttta
ggagaccaacctatgctcgatcaattaggtgaaggtttaaccgatgaagagaaacacgct
ttggttttgaaggcctacgaacatgtgaaggcctctttcatacgtttaactcgacccaat
ggccaacaatcagcaccagctaaaacttgccgtgatctatttgctgcctatcccgaatat
aattctggagaatattggattgatcccaatgagggtgacccacaagatgctattctagtg
tattgtgaaaaagaaagacgtgccacctgtatcagacctcaacccaaacagactaaggtg
attagctataagggaaaggaggaagaagaggcatggctaagcgagttgccatcgggaatg
aaaatccactacaaaactgattcctatcaaatgggcttcctacaattaatgtcagccaag
gcctctcagcaaataacattccattgtaagaacactgtggcctacaaggacgagaaaaag
gataccttaagaaatggattgaaattgctatcctggaatgacgccgaattaacacccgac
ggtcctcaacgtttgagatatgaagcagatgaagatggttgcagaaaacgttccaataac
tgggataaatcagttctaacctacaccaccgacaaatcccaacgtttgccgattgtcgat
atcgcggtgcgcgatatcggtaatgcaaatcaggaattccgcattgagttaggagcagct
tgtttctattag
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