Lucilia cuprina (Australian sheep blowfly): 111684867
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Entry
111684867 CDS
T06013
Name
(RefSeq) nuclear valosin-containing protein-like isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
lcq
Lucilia cuprina (Australian sheep blowfly)
Pathway
lcq03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lcq00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
111684867
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lcq03009
]
111684867
Ribosome biogenesis [BR:
lcq03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
111684867
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Nucleolin_bd
RuvB_N
AAA_16
AAA_22
AAA_5
AAA_14
nSTAND3
TIP49
RNA_helicase
AAA_28
AAA_33
AAA_2
Mg_chelatase
NACHT
AAA_18
AAA_17
Rad17
NPHP3_N
ABC_tran
TsaE
IstB_IS21
ATPase
Sigma54_activ_2
Viral_helicase1
AAA_19
Cytidylate_kin2
NB-ARC
AAA_7
Parvo_NS1
Vps4_C
Motif
Other DBs
NCBI-GeneID:
111684867
NCBI-ProteinID:
XP_023302849
LinkDB
All DBs
Position
5:complement(62693163..62698079)
Genome browser
AA seq
1019 aa
AA seq
DB search
MKKNKPVLYDPLIINRVKQYLEENIDKTYLDVGVMTKHLQDRYPEYTRRKVAPFRALVEQ
AYHVVSQSYGLNDPTPSGDDSDASDLEVMDDSSSNNIMSNMMNSLYNGPKAKSNAANSSN
PSKQQSGEAIDISSDESGDEGNPTKSNGKSVAKTAANLPLVKNSAITVTKIPPNPERTSN
KGSSSTTSTTTDSNSLPPLQPHQQQTGQKRHDNISISAASGGGQPTKKRKLDETGKHTTI
YTKNPMSNQFHKLDKQDNGNSSYILQQMQRHNQQQRHQQLDNHRESSNDPDRPFHGSGQR
SRKYKKEVQLRKSRESFQDIGGMEKTLKELCELLMHIKSPDIYFVLGLMPPRGILLHGPP
GCGKTLLAHAIAGQLNLPLIEIPATELIAGVSGESEERIRDVFDQAATSAPCVLFIDEID
AISSNRSMAQRDMERRIVSQLISSLDNLKLSEGGQSVLVIGATTRPDVLDPALRRVGRFD
HEIAISIPTRKDRKDILTIICEGLSVEPKCDFDKIAELTPGYVGADLLALVSRAATIAVK
RKCSEQMRAFQLKTQRNITIVDLDDDNEETDDKTGKEKEAEKDNTKEDEGAEAVSKADET
TKVTKITEEAEPMAVDTTTTDEAAKSEADKTEATSSKDKSDDIEMNDSTKSPDSVVVTTD
KSKDENVTNKKEVTENLKLQDPTLFELLNWLDNPPEDITFVSEFCITLDDFCEAVKVVQP
SAKREGFITVPDVTWDDVGSLQDIREELKLAVLAPVKFPEKLARLGLSAPSGVLLCGPPG
CGKTLLAKAIANEAGINFISVKGPELMNMYVGESERAVRACFQRARNSSPCVIFFDEFDS
LCPKRSDGNEGGSGTRVVNQLLTEMDGVEDRQGVYILAATNRPDIIDPAILRPGRLDTIL
YVGLPELQDRIEILKANTKSGTKPVLAADVSFEVLASLTDGYTGADLAGLVRQASMLALK
ESLNNTDLKLDDLCVNQGHFTKAIQMLRPSVSAQDRKVYDKLRLKYAAPRVPIADESVV
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaacaaaccagtactatatgatccactaattataaatcgtgttaaacagtat
ttggaagaaaatattgataagacttatttggatgtgggtgttatgaccaaacatttacaa
gatcgttatccagaatatacaagacgtaaagtagcaccattccgggcattagttgaacaa
gcttatcacgtggtttctcaaagttatggcctaaatgatccaacacccagtggagatgat
tctgatgcatcggatttagaagttatggatgattcatcatcgaacaacataatgagcaat
atgatgaacagtttatataatggcccaaaggccaaatctaatgctgcaaattcatctaat
ccttctaaacaacaatctggcgaggctattgatataagcagcgatgagagtggggacgaa
ggtaatccaacaaaatcaaatggcaaatctgtagcaaaaacagcagctaacttaccactg
gttaagaattcggctataactgttacaaagataccaccaaatcctgaacggacttcaaac
aagggttcttcatcaacaacttcaacaacaacagattctaattcattaccgcctttgcaa
ccgcatcagcagcagacgggtcaaaagcgtcatgataatatatcgatatcggcagcgagt
ggtggaggacagccgacgaaaaaacgtaagttggatgaaactggtaaacatacgactatc
tatacgaaaaatcctatgtcaaatcaattccacaaattagacaaacaagacaatggcaat
tcctcctatatactgcaacagatgcaacgccacaatcagcagcaacgtcatcagcaatta
gacaatcaccgggagagtagtaacgatccagatcgtccctttcacggcagtggtcaacgt
tcccgcaaatataagaaagaggtacaattgcgtaaatcacgtgaatcttttcaggatatt
gggggcatggagaaaactctcaaggagttgtgtgagcttttaatgcatattaaatcgcca
gatatatactttgttttgggtttaatgccgccgaggggtattttgttgcatggtccacca
ggatgtggtaaaaccttattagctcatgccatagcagggcaattaaatctaccgcttatt
gagataccagctactgaattaattgctggagtttctggtgaatccgaggaacgtatacgc
gacgtttttgatcaagctgccaccagtgcaccctgtgttttgtttattgatgaaattgat
gcaatatcttcaaaccgctcaatggcacaaagagatatggaacgtcgtattgtttctcag
ttgattagcagtttggacaatttaaaacttagtgaaggaggtcagtctgtgttggtaatt
ggagccaccacacgaccggatgttctagatcctgctctaagacgtgtgggtcgttttgat
catgaaattgcaattagtataccaacgcgtaaagatcgcaaagatattttgacaataata
tgcgagggcctatcggttgaaccaaaatgtgactttgataagattgccgaattgacacca
ggttatgtgggggctgatctattggctttagtatcacgtgcagccactatagctgtgaag
aggaaatgctctgaacaaatgcgcgcttttcagcttaagactcagcgtaatataactata
gttgatttggatgatgacaatgaagaaaccgatgataaaactggaaaagaaaaggaagca
gaaaaggataataccaaagaggatgaaggagctgaagctgtctctaaggcggacgaaaca
acaaaagtaactaaaataactgaagaagccgaacctatggctgtcgataccaccaccacg
gatgaggcagcaaaatccgaggcagataaaactgaggccactagcagcaaagataaatca
gatgatattgaaatgaatgattctacaaagtcaccagattctgtagttgttacaactgac
aaatcaaaagatgaaaatgttacaaataagaaggaagtaaccgagaatcttaaactgcag
gatcccacattgtttgaactacttaactggttggataatccaccagaagatatcactttt
gtatcagaattttgcataactttggatgatttctgcgaagcagttaaagttgttcaacct
tcagcgaaacgtgaaggttttattactgtaccagatgttacctgggatgatgtgggttct
ttacaagatataagagaagaattgaaattagcagttttggctcctgtaaaatttccagag
aaattggctcgcttgggactttcggcaccttcgggtgttttactgtgcggtccgcctggt
tgtggtaaaactcttttagccaaggccatagctaatgaagcgggtatcaactttatatca
gttaaaggacctgaattaatgaatatgtatgttggtgagagtgaacgtgccgtcagagca
tgctttcagcgagcacgtaattcttcaccttgtgttatattctttgatgaattcgattct
ctttgtcccaaacgttccgatggcaatgaaggtggttccggtactcgtgtcgtcaatcaa
cttttaactgaaatggacggtgttgaagatcgtcaaggtgtttacatattagccgctact
aatcgtcctgacattattgatcccgccattttacgtcccggacgtttagatactattttg
tatgttggtttaccggaactacaggatcgtattgaaatcttaaaagctaataccaaaagt
ggtaccaaaccagttttagctgctgatgttagtttcgaagttttagcttctttaacggat
ggctatactggtgccgatctggctggtcttgtacgtcaagcttctatgttggctcttaaa
gagtctctcaataataccgacctaaagttggacgatttatgcgtgaatcagggtcacttt
acaaaagctatacaaatgttaagaccctcagttagtgcgcaggatcgcaaagtttatgat
aaactacgtttaaaatatgctgcaccccgcgtaccgatagccgatgaaagtgttgtttaa
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