Lucilia cuprina (Australian sheep blowfly): 111685319
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Entry
111685319 CDS
T06013
Name
(RefSeq) FACT complex subunit Ssrp1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
lcq
Lucilia cuprina (Australian sheep blowfly)
Brite
KEGG Orthology (KO) [BR:
lcq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcq03000
]
111685319
03036 Chromosome and associated proteins [BR:
lcq03036
]
111685319
Transcription factors [BR:
lcq03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
111685319
Chromosome and associated proteins [BR:
lcq03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
111685319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
HMG_box_2
HMG_WDHD1
SR-25
Motif
Other DBs
NCBI-GeneID:
111685319
NCBI-ProteinID:
XP_046810854
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All DBs
Position
6:10168220..10173760
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AA seq
740 aa
AA seq
DB search
MSDTLEYDISAEVRGVMTPGRLKMTEQQIVFKNSKTGKVEQIAADDIDLINSQKFVGTWG
LRIFTKNGNLHRFVGFKDSENEKLGKFIKKTYNQDLVEKEMCVKGWNWGTAKFQGSVLSF
DKDHKTIFEVPLSHVSQCMTGKNEVTLEFHQNDDAPVGLMEMRFHIPIVESAEDDPVETF
QTNVMNKASVISASGDAIAIFREIHCLTPRGRYDIKVFSTFFQLHGKTFDYKIPMDSVLR
LFLLPHKDNRQMFFVLSLDPPIKQGQTRYHYLVLLFSPEEETSIELPFSEEELKEKYEGK
LEKEISGPLYEVMGKVMKVLIGRKITGPGNFIGHSGTAAVGCSFKAAAGYLYPLERGFIY
IHKPPIHIRFEEIASVNFARSGGSTRSFDFEVTLKNGTIHIFSSIEKEEYSKLYDFISQK
KLHVSNTGKDNKGGYKDVDFGDSDNENEPDAYLARVKAEAQEKDSDDDEGSEEESTDEDF
NPTGDVSDVAEEYDSNAQSDSDDSDASGKGSGSDGGEKKHKKEKKEKKEKVEKKQKSKKP
TKKKDSNKPKRATTAFMLWLNDTREQIKKDNPGIKITEIAKKGGEMWRELKDKSKWEEKA
AKDKQRYLDEMKDYKPTADDSDDEEKDNAKSGSKAASKKRKKESSSPNKKSANTSGSFKS
KEYISEDDSSSAEESKKKKDKSDEEDSEPEKKKTKSDKSKSKGGDKKQKKPASEEEDDDE
DEEEATASEEESEDEEEASD
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatactttggaatatgatatatcggcagaagtcagaggagtaatgactcccgga
cgtcttaaaatgaccgagcaacagattgtttttaaaaatagcaaaactggtaaagtggaa
caaattgcagcagatgatatagatttaattaattcccagaaatttgtgggcacttggggt
ttgagaatctttaccaagaatggtaatttacatcgttttgtcggctttaaggatagtgaa
aatgaaaaactgggcaaattcataaagaaaacctataatcaagatttggtggaaaaggaa
atgtgtgtcaagggttggaattggggtacagccaaatttcagggttctgtactcagtttt
gataaagatcacaagaccatctttgaggtgcccttgtcacatgtttcgcaatgtatgact
ggtaaaaatgaggtaactttggaatttcatcagaatgatgatgctcccgttggcctaatg
gaaatgcgtttccatatacccatagtggaatcggctgaggatgatcccgttgaaacattc
caaacaaatgtcatgaacaaagcctcggttatatcagcctctggagatgctattgccata
ttccgtgagatacattgtctgacgcccagaggtcgttatgatatcaaagttttctccaca
ttcttccaactgcacggtaaaacttttgattacaaaatacccatggactcagtgttgcgt
ttgtttttattgcctcataaggacaacagacaaatgttctttgtattgtctttggatcct
cccataaaacaaggtcaaacacgttatcactatttagttttactcttcagtcccgaagag
gaaacttcaatagaattacctttctcggaggaagaattaaaagagaaatatgagggtaaa
ttggaaaaggaaatatcgggtccgctctatgaagtcatgggcaaggtaatgaaagtatta
ataggacgcaagataaccggaccgggtaattttataggacactccggcaccgctgctgta
ggttgttccttcaaagcagccgctggctatctctatcctttggaacgtggttttatttac
atccacaagccacccatacacatacgtttcgaggaaattgcctcggtaaattttgcccgt
agtggtggttcaacacgtagttttgattttgaagtaacactcaaaaatggcaccatacac
attttctcttccatcgaaaaggaagagtactctaagctgtacgatttcattagtcaaaag
aaactgcatgttagcaatacgggtaaagataataagggcggctataaggatgttgatttc
ggtgattctgacaatgaaaatgaacccgatgcctatttggcacgtgttaaagccgaagca
caggagaaagattccgacgatgatgagggttcagaagaagaatcaactgatgaagatttc
aatccaaccggtgatgtttcggatgtggcagaggaatacgattcaaatgctcaaagtgat
tcggatgattcagatgctagtggcaagggtagtggcagtgatggtggtgagaagaaacat
aaaaaggagaagaaagagaaaaaagaaaaagtggagaaaaaacagaaatcgaaaaaaccc
accaaaaagaaagattccaataaacccaaacgagccacaaccgccttcatgttatggctc
aatgatacacgcgaacaaatcaaaaaagacaatcccggtataaaaataaccgaaattgcc
aaaaaaggcggtgaaatgtggcgtgaactaaaggataaatcgaaatgggaagagaaagca
gccaaggataaacaaagatatttagatgaaatgaaagactataaacccacagccgatgat
agtgatgacgaggagaaggacaatgcaaaaagtggcagtaaagcggccagtaaaaaacgt
aaaaaagaatcatcatcacccaataaaaaatccgcaaatacatcgggatcttttaaatct
aaagaatatatatcagaagatgattcttcatcagcggaggagagtaagaaaaagaaagat
aaatccgatgaggaagattcagaaccggaaaagaaaaagactaaaagcgataagtctaaa
tcgaaaggtggcgataaaaaacaaaagaaaccagccagcgaggaagaagatgatgacgaa
gatgaggaagaagccacggcttctgaagaagaatctgaggatgaagaagaggctagtgat
taa
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