Lucilia cuprina (Australian sheep blowfly): 111685591
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Entry
111685591 CDS
T06013
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
lcq
Lucilia cuprina (Australian sheep blowfly)
Pathway
lcq03440
Homologous recombination
lcq03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lcq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111685591
03450 Non-homologous end-joining
111685591
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcq03032
]
111685591
03400 DNA repair and recombination proteins [BR:
lcq03400
]
111685591
DNA replication proteins [BR:
lcq03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
111685591
DNA repair and recombination proteins [BR:
lcq03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
111685591
BRCA1-C complex
111685591
NHEJ (non-homologous end-joining)
MRX complex
111685591
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
SbcC_Walker_B
AAA_15
SMC_N
AAA_21
AAA_29
AAA_16
ABC_tran
AAA_22
YdjO
Motif
Other DBs
NCBI-GeneID:
111685591
NCBI-ProteinID:
XP_023303627
LinkDB
All DBs
Position
5:54453266..54458223
Genome browser
AA seq
1310 aa
AA seq
DB search
MSTIEKLTIQGIRSFGGNAGDAQLIRFSSPVTLILGENGCGKTTVIECLKYALTGECPPG
SDRGKNFVHDPKIFSLTDVLGQIKLEVRNVQGARLSICRSMKLGMKRNKITFETLDATIN
YLNDDDKKGSESISKRCADVDLVMSQFMGVSKAIINNVLFCHQEDSSWPLDEAKKLKEKF
DAIFGITEYNKALDRIIKMRKEEMEQLKIKEADLRFMEHLKQEMEGKSLALQKYKQKAQT
IDDQCKLCDDEMAPIEERLKQIHKIEYEVGKYQAQKVELQTKQKNCTDQMNGLKKKIKKL
FEGTMEELDNEISSFQQRIAEKRMERKEVEEKLKGQRLEEKGLQHKHNEIDKKRVVIQQQ
KQKEQDCKQKRADKLKALCQELNIPIEFDLMNSVNEITELLEEIQAFLAAEHCKISETVT
QHDKEDQERQTKIDQLRVELTKLQESVATMQKQKKAYEKESEQVERNILQTEKATQQLKV
VNEKLKETEQCYEESLAKFNQNEFRESLKNDKETIKKLETQFRKVDERLTFLNSISKLVA
ELSIKEKELEKREEEMRKVKSKHSDNFRKVFEEGRTIETNFQRHLKASYEKSRIKIKEYN
EKLNSMKLKHQRIEIKRKNLKDDLQKCEKELEDCKEKIFEKCHSTPYEEMLAKSKASVSK
YQLEHGAQKSAEVFYKNYLQKIDEEPYCPLCQKCMDTEEASNLTTELTDKIQDLPQNIER
VEKLLKEEQKKYESLLHLKPIIDKVARFEAEIPQKREVLKSLQNQLAESSTEMENMQTLL
AEPTTTMETANSMMGDMSLLDECIKESNRLKNDIEKLKRKMPENTESDNISIDEVQAEKT
TISTELEEKRKELDKNQQYYEKNMDALNKLRELKNSLKDQQIKLQEGIQNLPQLKERKAE
LSNLLVAMLAEMQEKQAKVSPLKQQLTAASAEKSQLKEKNRIKINQMQKKLDTFRRMDHD
INRLDNEVLDYQQLNLDQQIKDKEDDLNASKEELKKIAQTIAETNEQLDAIKAEIANQES
IDRDFKDNRELKILEEKLKDLNVKFEALMEELGKLDFSNVSKEKSELTKKRDKITVRKGE
LLGQRGEVKHQITKLERELAEPKYRDSLVNYRRIYYEVQLTRKVANDLGQHRVALEWALM
QFHTEKMQEINRLIREYWRLIYRGNDIDYIQIQTEEGKESASPMDRRRSYNYRVIQSKNN
SEIEMRGRCSAGQRVLASLIIRMALAETFSSNCGVLALDEPTTNLDRNNILSLCDALNRI
VEERQTQSNFMLIIITHDEAFISTLGKINSYHRVFRNDECKSVIRQVQVA
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccatcgagaaacttacgatacaaggtatacgcagttttggtggtaacgctggt
gatgcacagcttatacgttttagttcgccggtaactttgatattgggcgagaatggttgt
ggcaagacgaccgtcattgaatgtcttaagtacgccttaacgggtgaatgtccgcccggc
agtgaccgcggcaagaatttcgttcatgatcccaagattttcagtcttaccgatgtattg
ggacaaattaaactagaggtgcgaaatgtgcagggagcccgcctttccatctgtcgttcc
atgaagctgggtatgaaacgtaataaaataacatttgaaactttggatgccactattaat
tatttgaatgatgatgacaagaagggcagtgaatcaataagtaaacgttgtgccgacgtt
gacttggtcatgagtcaatttatgggtgtctccaaggccattataaataatgtactcttt
tgccatcaggaagattccagctggcctctggatgaggcaaagaaacttaaagaaaaattt
gatgccatttttggcattaccgagtacaataaggctttggatcgtattatcaaaatgcgc
aaagaggaaatggaacaattgaaaattaaggaagccgatctacgttttatggagcatttg
aaacaagaaatggagggaaaatctttggctcttcaaaaatataaacaaaaagcccaaaca
attgatgatcaatgtaaattatgcgatgatgaaatggctccgattgaggaacgtctaaag
cagatacataaaattgaatatgaagtgggaaagtatcaggctcaaaaggtggaactgcaa
actaagcaaaaaaattgcaccgatcaaatgaacggactcaagaagaaaattaaaaaacta
ttcgaaggtaccatggaagaattagacaatgaaatatcatcattccaacagagaatcgcc
gaaaaacgtatggaacgtaaggaggttgaggaaaaacttaaaggtcagagactggaagag
aaaggtctacagcataaacacaatgaaattgataagaaacgtgttgtgatacaacagcaa
aagcaaaaagaacaagattgcaaacaaaaaagagcagataaattgaaagcactttgtcag
gaacttaatatacccattgaatttgatttaatgaattcggtaaatgaaatcactgagcta
ttagaggaaatacaagcattcttagcggccgaacattgtaaaataagtgaaactgttaca
caacacgataaggaagatcaagagcgtcaaactaaaatcgatcaattgcgtgttgaattg
actaagttgcaagagtccgttgccactatgcaaaagcagaaaaaagcttatgaaaaagag
tccgagcaagttgaaaggaatattttacaaacggaaaaagccacccaacaacttaaagtg
gttaacgaaaaactcaaagagaccgaacaatgttacgaagagtcgctggcaaaattcaat
caaaatgaatttcgtgaatccttaaagaatgacaaggaaactataaaaaaattagaaaca
caatttcgtaaagtcgatgaacgtttaacattccttaattccatatcgaaactggtcgct
gaattgagtattaaagagaaggaactagaaaaacgtgaagaagaaatgcgcaaagtaaag
agtaaacacagtgataactttcgcaaagttttcgaagagggacgtactatagaaacaaat
ttccagcgtcacttaaaagcctcctatgaaaaatctcgcattaaaattaaagaatataat
gaaaaactaaattccatgaaattaaaacatcaacgtattgagattaaacgtaaaaatctt
aaagatgatttacaaaaatgtgaaaaagaattggaagattgtaaagagaaaattttcgaa
aagtgtcattcgaccccttacgaggaaatgttggccaaatcgaaggcatctgtgagtaaa
tatcaattggaacatggtgctcaaaaatcagctgaagtattttataagaattatttgcaa
aaaatagatgaagaaccctactgtcctttgtgtcagaagtgtatggacacagaagaggcc
tctaatctaaccacggaattaactgataaaatacaagatttaccacaaaatattgaaagg
gtagagaaactgctcaaagaagaacaaaagaaatatgaaagtttattacatttaaaaccg
attatcgataaagtggcacgttttgaagcggaaataccccaaaagagagaagtattaaaa
agtttgcaaaatcaattggccgaatccagtactgaaatggaaaatatgcaaacacttttg
gccgaacccactaccaccatggaaaccgccaattccatgatgggagacatgtcacttttg
gatgagtgcattaaagaatcgaatcgtcttaaaaacgatattgaaaagttaaaaagaaaa
atgcctgaaaatactgaaagtgacaatatttccatagatgaggtgcaggcagaaaaaacc
actatatcaacggaattggaagagaaacgcaaagagttggataagaatcaacaatattat
gaaaagaatatggatgctcttaataaactaagagaattgaaaaattctttaaaagatcaa
caaataaaactccaggaaggcatacaaaatttaccacaacttaaggaacgtaaagctgaa
ctttcgaatcttttagttgccatgttggcggaaatgcaagagaaacaagctaaagtctcg
ccgctaaagcaacagctaacggccgcctctgcagaaaaatctcaactgaaagaaaagaat
cgcattaagataaatcaaatgcaaaagaaactggatacttttagaagaatggatcatgac
attaataggctggacaatgaagttttggattatcaacagttaaatctggatcaacaaata
aaagataaagaggatgatttaaatgccagcaaagaagaacttaaaaaaatagctcaaacc
atagccgaaactaatgagcaattggatgccataaaagcggagattgccaatcaagaatct
atagatcgtgactttaaagacaatcgtgaattaaagatactggaagaaaaacttaaagat
ttaaatgttaaatttgaagcccttatggaagaattgggcaaattagatttctcaaatgtc
tcgaaagagaaatcggaattaacgaaaaaacgtgacaaaataaccgtgcgtaaaggtgaa
cttttgggtcagcgtggcgaggtcaaacatcagataacaaaattagaaagagaactggct
gaaccgaaatatcgtgattctcttgttaattatcgtcgcatttactatgaagttcaattg
accaggaaggtagctaatgatttgggtcaacatcgtgtggccttagagtgggcccttatg
caattccataccgaaaaaatgcaagaaattaatcgtttgatacgtgaatattggcgtctc
atttatcgtggcaatgacattgattacatacaaatacaaacggaagagggtaaggagtca
gcctcacccatggatcgtcgtcgcagttataattatcgtgttatacaatcgaaaaataat
tccgaaattgaaatgcgtggtcgctgtagtgccggtcaacgtgtactcgcctctctcatt
atacgtatggctttggccgaaacatttagcagtaactgtggtgttttggctttagatgaa
cccaccaccaatttggatcgcaataatattttatcattatgtgatgccctcaatcgtatt
gtcgaagaacgccagactcaatctaattttatgttgatcataatcactcacgatgaagcc
ttcatttccacattgggtaaaatcaatagttatcatcgtgttttccgtaatgatgagtgt
aaatctgtaatacgtcaagttcaagtagcctag
DBGET
integrated database retrieval system
