Lucilia cuprina (Australian sheep blowfly): 111686135
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Entry
111686135 CDS
T06013
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
lcq
Lucilia cuprina (Australian sheep blowfly)
Pathway
lcq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lcq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111686135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcq03041
]
111686135
Enzymes [BR:
lcq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111686135
Spliceosome [BR:
lcq03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
111686135
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
WHD_HA2
HA2_C
Helicase_C
DEAD
AAA_22
AAA_19
Flavi_DEAD
nSTAND3
nSTAND_NTPase5
AAA_30
SRP54
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
111686135
NCBI-ProteinID:
XP_023304208
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All DBs
Position
2:complement(59235725..59239007)
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AA seq
891 aa
AA seq
DB search
MSRNRKRDAQSSSSEEIDSEEEIRRKDLKERDEFAERLKKKDEGRTRKVLESSSSRKAIE
EAAKRLKLEHEDRDKILPQLRIQSRRKYLEKRKEDKVAELEADILDDEYLFEESVLTDKE
RQEREYKKQLLTIAKEHEKARELERIQRYHMPRDLKKGEKEEYVEVDENERLPNSEQKKW
EAEQLASARFQFGAKDAKAQEEYELLLDDQIDFIQALTMDGSKDKTSKEPEMTEAERKRM
TIEETRKSLPVYPFKEDLIAAIKEHQILIIEGETGSGKTTQIPQFLVDAGFTADKKKIGC
TQPRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDCTSERTVLKYMTDGTLHREFLSEPD
LGSYSVMIIDEAHERTLHTDILFGLVKDIARFRPELKLLISSATLDAEKFSQFFDDAPIF
RIPGRRYPVDIFYTKAPEADYIDACCVSVLQIHATQPLGDILVFLTGQDEIETCQEILQD
RVKRLGSKIRELVIIPVYANLPSDMQAKIFEPTPPNARKVILATNIAETSLTIDNIIYVI
DPGFAKQNNFNSRTGMESLMVVPISKASANQRAGRAGRTAPGKCFRLYTAWAYKHELEDN
TVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGELTK
LGRRMAEFPVDPMMGKMLLASEKYKCSEELVTIAAMLSVNSAIFYRPKDKIIHADTARKN
FNHIHGDHLSLMQVYNQWAETDYSTQWCYENFIQYRSMKRARDVREQLVGLMQRVEIDMV
SCLPETINIRKSITAGYFYHVARLSKGGNYKTIKHNQTVMIHPNSSLFEELPRWVLYHEL
VFTTKEYMRQVIEIESKWLLEVAPHYYKAKELEDSTNKKMPKVQGRATMTE
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaaatcgtaaacgtgatgctcaaagtagcagttctgaagaaattgacagtgaa
gaggagatacgtcgtaaagatttaaaggaaagagatgaatttgccgaaagactaaagaaa
aaagatgaaggacggacacgcaaagttctggagtcaagctccagtcgtaaggcaatcgaa
gaagcggctaagcgtttaaaattggaacatgaagatagggataaaattttgccacagtta
cgtatacagtcgagaagaaagtatttggaaaaacgaaaagaagataaagtggctgaattg
gaagcggatattttggatgatgaatatttgtttgaggagtcggttttaacggacaaagag
cgtcaggaaagagaatacaaaaagcaattgttaaccatagccaaggaacatgaaaaggca
cgtgaattggaacgtatacagcgttatcatatgcctagagatttaaaaaagggagaaaaa
gaggagtatgtggaagtggatgaaaatgaaagactaccgaattccgaacaaaagaaatgg
gaggcagaacaattagcttcagccagatttcaattcggagctaaagatgctaaagctcaa
gaagagtatgaacttttactagatgatcaaatcgatttcatacaagcacttaccatggac
ggttcaaaagataagacctcaaaagaacctgaaatgacagaagctgaacgtaaacgaatg
actatagaggaaacacgtaaatctctgccggtttatccctttaaggaagatctaatagca
gccattaaagagcatcaaattcttataattgaaggagaaactggttcgggcaagacaaca
caaataccacagtttttggtggatgctggttttacagcagataaaaagaaaattggttgt
actcagccgcgtcgtgtggcggctatgtctgtggccgcacgtgtagccgaagaaatgggt
gttaaattgggcaatgaagttggctacagtatacgttttgaggattgtacttcggaaaga
actgttttaaaatacatgactgatggtactcttcacagagaatttttgtcggaaccagat
ttaggttcttatagtgtaatgattattgatgaggctcatgaacgtaccttacatactgat
attttatttggtctagttaaagatatagcacgttttcgtcccgaactaaaattgttaata
tcaagtgcaactttagatgctgagaaattttcgcaattcttcgatgatgctccaatattt
cgtataccaggcaggagatatccagtggatatattttatactaaagctccagaagctgat
tatattgatgcctgttgtgtgtccgttttgcaaattcatgctactcaacctttgggagat
attttagtattcttaacgggtcaagatgaaattgagacttgccaggagattctgcaagat
cgtgttaaacgtttaggctccaaaattcgcgaactggttataataccagtctatgcaaat
ctacccagtgatatgcaggcgaaaattttcgaacccactccacccaatgcccgcaaagtt
attttggccaccaatatagcggaaacttctctaaccatagacaatattatttacgttatt
gatcctggtttcgcgaaacagaataatttcaattcccgcactggcatggaatcattaatg
gtggtgccaatttcaaaagcctcagctaatcaaagagctggtcgtgctggacgtacagca
ccaggcaaatgttttcgtttatataccgcctgggcttataagcatgaattggaggataat
acagtacccgaaatacaacgtattaatttgggaaatgcggtactaatgcttaaagcttta
ggcataaatgatttaatacattttgattttctggatccaccacctcatgaaactttagtg
ttggctttagaacaattgtatgctttgggcgcattaaatcatcatggtgaattaacaaaa
ttaggtagacgtatggcagaatttccagtagatcctatgatgggaaaaatgttgctggca
agtgaaaaatacaagtgttccgaagaattggtcaccatagcagctatgctttcggttaat
agtgcaatattctacagacccaaggacaaaatcatacatgccgatacagctcgcaaaaat
ttcaatcatattcatggtgatcacttatcccttatgcaggtttacaaccaatgggccgaa
acggattacagtactcaatggtgttatgagaatttcatacaatatcgttccatgaagaga
gcacgcgatgttcgcgaacaattggtaggtctaatgcaaagagttgaaattgatatggtc
tcctgtttaccggaaacaattaatatacgtaaatcaataacagctggttatttttatcat
gtggcacgtctatcgaaaggtggcaattacaagaccattaaacacaatcaaacagtaatg
atacatccaaattcatctttattcgaggaattaccacgctgggtactgtatcatgaactg
gtattcacaacgaaagaatatatgagacaagtaatagaaatcgaaagtaaatggttgttg
gaagtagcgccacactactataaggccaaagagctagaggactcaacgaataaaaaaatg
cctaaagtacagggtagagctacaatgactgagtaa
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