Lucilia cuprina (Australian sheep blowfly): 111686362
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Entry
111686362 CDS
T06013
Name
(RefSeq) ATP-dependent RNA helicase p62-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
lcq
Lucilia cuprina (Australian sheep blowfly)
Pathway
lcq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lcq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111686362
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcq03041
]
111686362
03009 Ribosome biogenesis [BR:
lcq03009
]
111686362
Enzymes [BR:
lcq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111686362
Spliceosome [BR:
lcq03041
]
Complex A
U1 snRNP components
U1 related factors
111686362
Complex B
111686362
Ribosome biogenesis [BR:
lcq03009
]
Eukaryotic type
Pre-60S particles
Helicases
111686362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Utp25_C
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
111686362
NCBI-ProteinID:
XP_023304489
LinkDB
All DBs
Position
5:complement(48283328..48285837)
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AA seq
593 aa
AA seq
DB search
MAPPKSGNQNARGRGGRSDGGGSRGRGGGFAGNNRGHVRNGRVERPGRPSGSGGGGHSGG
GFGRDQRLRFGGGGGNRGMNNNRNPDDFSNLREINWMQVRLPPFQRDFYKEHPKTRARPM
NEVERYRAANEITVRGPAPKPIIYFDEACFPDYCMNEIRRQGYSEPTPIQAQSWPIAMSG
NNLVGIAMTGSGKTLAFILPAIVHINHQPPLANGDGPIALVLAPTRELAQQIKKVADDFG
SHVYVRNTCIFGGTPKTRQTNDLESGVELVIATPGRLLDFLANGVTNMKRCTYLVLDEAD
RMLDMGFEPQIRKILSQIRPDRQILMWSATWPKEVRQLAEDFLGNNYIQINIGSLELSAN
HNIRQYVDVCHETDKGSKLKSLLSNIYDQPHPGKIIIFVATKKKVDELARFINGFGVQVG
SIHGDKSQSDRDNVLSDFRNGRSNILVATDVAARGLDVDGIKYVINFDFPQSSEDYIHRI
GRTGRKHSTGTSYAFFTTKNAKCAKALVDILREANQNVNPDLEYMARNAASILSKEKNNN
RGNNMNGFNNRGGNSGGGGHRFGNGGGNFGNNRGGGGGGGGAIRPRNAYNSRN
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgccaaaaagcggaaaccagaatgctagaggacgagggggacgttctgatggc
ggtggctccagaggccgtggtggtggattcgcgggtaacaataggggtcatgtaagaaat
ggtcgtgttgagagacctggtcgtccttcaggtagtggaggtggtggtcattcgggaggt
ggctttggacgtgaccaacgtttaagatttggtggtggtggcggtaatagaggcatgaat
aataatagaaatcccgatgacttttcaaatctgcgagagattaattggatgcaggtacgt
ttgccgccctttcaaagggatttttacaaggagcatccaaaaaccagagcacggcccatg
aacgaagtggaacgttatagagcggccaatgaaattactgtacgcgggcctgctccaaaa
ccaataatttactttgacgaagcctgctttccggactattgtatgaatgagatacgacgt
caaggctacagtgagcccacgcctatacaagctcagtcttggcccatagctatgagtggt
aataatctggtcggtattgcaatgactggttctgggaaaactttagctttcattttgcct
gccattgtccacataaatcatcagccgcctttggcaaatggcgacggtcccatagctctg
gtattggcaccaaccagagaattggctcaacaaattaaaaaagtggctgatgattttggt
tcacatgtttatgtccgcaatacgtgtatttttggtggcacaccgaaaacgcgacaaaca
aatgatcttgaaagtggagtggaactggttattgcaacacccggccgtttgctagacttc
ttagctaacggggtaacaaatatgaaacgttgtacatatttggtactcgacgaagccgat
cgtatgttggatatgggttttgagccacaaatacgtaagatattaagtcagatacgacca
gatcgtcagattttaatgtggagcgccacttggccaaaagaggttcgtcaactagctgaa
gatttcctgggtaacaattacatacagataaacatcggttctttggaactctcagccaat
cacaacatacgccaatatgttgatgtctgtcacgaaacagacaaaggctcaaaacttaag
agtttactgtcaaatatttatgatcaacctcatcccggtaaaattatcattttcgttgct
accaaaaagaaagtcgatgaattggcacgttttattaatggctttggtgtacaagttggt
tccattcatggcgataaatcgcaatcagatcgtgataatgttttatctgacttccgcaat
ggtcgttccaatatattagtggctacagatgtggcagctcgtggtttagatgtcgatggc
attaaatatgttataaatttcgattttccccaatcatcggaggattatattcatcgtata
ggacgtactggacgtaagcattctactggtacatcgtatgcattctttacaactaaaaat
gctaaatgtgccaaggcattggtggatatattgcgagaggccaatcaaaatgttaatccg
gatttagagtatatggctcgtaatgccgcatctatattaagtaaagagaaaaacaataat
cgtggtaataacatgaatggttttaataatagaggaggcaacagcggtggaggtggtcat
agatttggtaatggtggtggaaatttcggcaataacagaggaggaggaggaggtggtggc
ggtgccatcagacctcggaatgcctacaattctagaaattaa
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