Lucilia cuprina (Australian sheep blowfly): 111686976
Help
Entry
111686976 CDS
T06013
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
lcq
Lucilia cuprina (Australian sheep blowfly)
Pathway
lcq03013
Nucleocytoplasmic transport
lcq03015
mRNA surveillance pathway
lcq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lcq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111686976
09122 Translation
03013 Nucleocytoplasmic transport
111686976
03015 mRNA surveillance pathway
111686976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcq03019
]
111686976
03041 Spliceosome [BR:
lcq03041
]
111686976
Enzymes [BR:
lcq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111686976
Messenger RNA biogenesis [BR:
lcq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111686976
Spliceosome [BR:
lcq03041
]
Complex C
Other components
EJC/TREX
111686976
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
111686976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
MoaE
AAA_19
Motif
Other DBs
NCBI-GeneID:
111686976
NCBI-ProteinID:
XP_023305150
LinkDB
All DBs
Position
2:complement(20737851..20741452)
Genome browser
AA seq
423 aa
AA seq
DB search
MADNDDLLDYEDEEQTETTVAETQEAPKKDVKGTYVSIHSSGFRDFLLKPEILRAIVDCG
FEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPTENVVYVLVMCHTRE
LAFQISKEYERFSKYMPTVKVGVFFGGLSIQKDEESLKNVTPHIVVGTPGRILALIRNKK
LNLKHLKHFILDECDKMLEQLDMRRDVQEIFRSTPHGKQVMMFSATLSKEIRPVCKKFMQ
DPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCMALA
QLLTEQNFPAIGIHRGMTQEERLNRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDM
PEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKILNEVQDRFDVNITELPDEIDLSSYI
EGR
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggccgataatgatgatcttttagattacgaggatgaggaacaaaccgagaccaccgtt
gccgaaacacaagaggcacctaaaaaagatgttaaaggtacctacgtatctatacacagt
tctggtttccgtgattttcttttaaaacctgaaattctaagagctattgttgattgtggt
tttgagcatccttcggaagtacaacatgaatgtattccccaggctgttctaggcatggat
attctctgccaggctaagtctggtatgggtaaaacagcagtatttgtgcttgccacattg
caacagctggaacccactgagaatgttgtttatgttctagtcatgtgtcacactcgtgaa
cttgcattccaaattagtaaggaatacgaacgtttttccaaatatatgccaacagttaag
gttggagttttctttggtggcttatccatacaaaaggatgaagaatctttgaaaaatgtt
acacctcatattgttgtcggtacccctggtcgtattttggctttgattcgcaataagaag
ttgaacttgaagcatttgaaacattttattctggatgaatgtgataaaatgttggaacaa
cttgatatgcgtcgcgatgttcaggagatattccgcagtacaccacatggaaaacaagtt
atgatgttttccgctactctaagcaaagaaattcgaccggtttgcaaaaaattcatgcaa
gatcccatggaagtgtatgtcgatgacgaagccaagttgacattgcatggtttgcaacag
cattatgttaagttgaaggagaatgaaaagaacaaaaaactatttgaacttttggatgta
ctagagtttaatcaagtcgttattttcgttaaatctgtacaacgttgtatggctttggca
caattgctaactgaacaaaatttccctgccattggtattcatcgtggcatgacacaggag
gagcgtttaaatcgttaccaacaatttaaggatttccaaaagcgtatattggtggccacc
aatttgtttggtcgtggtatggatattgaacgtgtcaatattgtcttcaactatgacatg
cccgaggattccgatacctatttgcatcgtgtggcccgtgctggtcgttttggtactaaa
ggtttggccattacctttgtttcggatgaagctgatgccaagattttaaatgaagtccaa
gacagatttgacgttaatattaccgaattgcccgatgaaatcgatctgtcatcttacatt
gagggccgataa
DBGET
integrated database retrieval system
