Lucilia cuprina (Australian sheep blowfly): 111687203
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Entry
111687203 CDS
T06013
Name
(RefSeq) CCR4-NOT transcription complex subunit 10 isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
lcq
Lucilia cuprina (Australian sheep blowfly)
Pathway
lcq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lcq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111687203
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcq03019
]
111687203
Messenger RNA biogenesis [BR:
lcq03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
111687203
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_14
TPR_4
Motif
Other DBs
NCBI-GeneID:
111687203
NCBI-ProteinID:
XP_023305395
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Position
4:133438..163189
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AA seq
621 aa
AA seq
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MEQTVELNMPELLSTPDKIRVDGHDYVLITKASDEFDRGNYDSCIDILEQLEEFKNHDIK
LEHNKSVAIFYKGNCRDYVSLLKYLQKLDTKEYTSEKDIVLSPLSFFTTYNKAVIYYHRH
MYKAALDVMEPLFNKINTYDENVLAMLGILELRLLLASNQPKKAYFFLEEFLHKLGINIL
HITSDDCNIQESLPRLDDNLGKGLKLMSLLTQVVNKKPVLVPEDVSPEISALKAHQYYIM
KDFQMAAKQLNKINGYRYVNDFYNKELNTLIANNMGVIHLRVRHYAIAANFFQNAISFDK
HVAVNLRNIRLHHMSSVKSCEILYNLGIAMLHLRRPKEAFQCFLVPLKTYHSNPRLWFRV
AEACIMEYEIKKSFAEKLYPINGGINLLSNRVSYTENSQSSAVLEPTMEFAALSLRNALT
LTQSFLTKLDVSQNDECISSTLESHNWRTITDNNFCPPSRPVTKQTFCILLSSIYAAYSY
VSLRLGDYVTALEMAEKLLKTESLSDAHKMLAHMYAGEAFIMMNKLSDARSHLELTSVSN
LNIFDFETKDWQVKSVDAAQNIVRYNLAVAIFLQGDAEMARNLLNTCTHPIVSQKVSTFK
KLQTSMAPASATSTTYFTSRI
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaactgtggaattgaatatgccagaattgctatcaactccagataaaataaga
gttgatggtcatgattacgttttaataacaaaagctagtgacgaattcgatagagggaat
tatgattcctgtatcgacattttggaacaacttgaggagttcaagaatcacgacattaaa
ttggagcacaacaaatcggtagctatattttacaagggtaattgtagggattatgtgagc
ttgttaaaatatcttcagaaactagacacaaaagagtatacttctgaaaaagatattgtt
ttatctccgttatcattttttacaacatataataaagcagtaatttattatcatcgtcac
atgtataaagcggctttggatgtaatggagccattattcaacaaaataaacacctatgat
gaaaacgtgttagcaatgctgggtattttagagctgagacttctattggcgtctaaccaa
cctaaaaaggcatatttttttctcgaagaatttttgcataaattggggataaatatatta
catataacttcagatgattgtaatattcaagagtctttacctagattagacgataactta
ggaaaaggtttaaaactgatgtcattgttaacacaggttgttaacaaaaagcccgtttta
gtgccagaggatgtttctcctgagatatcggcattaaaagcacatcaatattacataatg
aaagatttccaaatggcggcaaaacaattaaacaagattaacggttaccgatatgtgaat
gatttttataataaggaattgaataccctgatcgccaacaacatgggtgttatacattta
cgtgtccggcattatgcaattgcagccaacttctttcaaaatgcaatatcatttgataaa
catgtagcagtaaatcttcgtaatatccggttacatcatatgagttcagtgaagtcttgt
gaaattctctataatttgggaattgctatgctgcatttaaggcgacccaaagaagcattc
caatgttttcttgtgcctttaaaaacctatcatagcaatccaagactatggtttagagta
gcagaagcttgtataatggaatatgaaataaaaaaatcttttgcggaaaaactatatcca
atcaatggcggaataaatttattatcaaatagagtatcctacacagagaatagtcaatcg
tcagctgtactagaacctaccatggaatttgctgcattaagtctacgtaatgctttgact
ctaacgcaatctttccttacaaaactagatgtgtcacagaatgacgagtgtattagtagt
acattggaaagtcacaattggcgcacaattacagataataatttctgtcctccatcccgt
ccggtaacaaaacaaaccttttgcattttactttcatctatttatgcggcttatagttat
gtttcgttgagattaggtgattatgtcacagcattagaaatggctgagaaactattaaaa
acggaatctctttccgacgctcataaaatgttggcacacatgtatgctggtgaagctttt
attatgatgaataaattatctgatgccagatcccatttggaacttacatcagtttcgaac
ttaaacatatttgattttgaaacaaaagattggcaagttaaatcagtggatgctgctcaa
aatatcgttcgttacaatttggcagtggctatatttttacaaggcgatgctgaaatggcc
aggaatcttctaaatacttgtactcaccctatagtatcacaaaaagtatctacattcaaa
aaactgcaaacttcaatggcgccggcttctgctacatcaacaacttactttacgtccagg
atctga
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