Lucilia cuprina (Australian sheep blowfly): 111687825
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Entry
111687825 CDS
T06013
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
lcq
Lucilia cuprina (Australian sheep blowfly)
Pathway
lcq03440
Homologous recombination
lcq03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lcq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111687825
03460 Fanconi anemia pathway
111687825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcq03032
]
111687825
03400 DNA repair and recombination proteins [BR:
lcq03400
]
111687825
Enzymes [BR:
lcq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
111687825
DNA replication proteins [BR:
lcq03032
]
Eukaryotic type
DNA Topoisomerases
111687825
DNA repair and recombination proteins [BR:
lcq03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
111687825
FA (Fanconi anemia) pathway
111687825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
Motif
Other DBs
NCBI-GeneID:
111687825
NCBI-ProteinID:
XP_023306069
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Position
2:55692733..55700975
Genome browser
AA seq
1348 aa
AA seq
DB search
MLKVLKCYKFFSSKRCYAKKDLNIEMKYLNVAEKNDAAKTIAGQLSNGTARRREGLSVYN
KIYEFEATVLGRKSKMVMTSVSGHLLTFEFLSSYRNWNNVDPQSLFDAPVRKACSENFAA
IKRTLEREVRSCNGLIVWTDCDREGENIGFEIIDVCRAVKPNITVYRAIFSEITKASVNR
ALQNLTQPDKRQSDAVDVRSELDLRTGAAITRFQTMRLQRLFPEKISDKLISYGSCQIPT
LGFVAERYKEIEAFVSEPFWKIKVTHTIEDLTVEFLWARNRLFDKQACEDYYLLVIANPT
ATVESVTVKPKSKWRPTPLDTVELEKLGSRKLKLSAKEVMTIAEKLYTKGIISYPRTETN
MFSKEIDLKSLVEQQTGHGVWGSFAQRVAEWGPNPRNGNKSDQAHPPIHPTKMVPNLDGN
EGRVYELICRHFLACVSKDATGSETIVTISIEGEKFTATGLVIYERNYLDVYIYDKWNAK
QIHKYEQGQKFEPTEITMPEGATTAPPLLTEADLIALMEKHGIGTDATHAEHINTIKERG
YIGVVDKGCLVPGVIGMGLYEGYDAMELALAKPMLRAEFEQDLKKICLGEKDPKTVLREQ
IVKYKEAYKQIMDKISAMDEKMAQRILETPNQHNTNNTNSNSNTESRSGASENQNRLQEI
FKCPKCSIAPMALKPKKNQTGFLIGCLNFPDCKNCIWWPDECKEPHALDETCNKCGSEMK
LIKFKFSNPYHKAMFNCPSGWYKICLRCDEQFRNIFNINLDSVKRVGPIVADISSIPINY
GVTTQPAPAAGSNNNTGGKKSKSTTTKTKTTNDAAGETETKAKKTRKPSTKTTTTSANQK
KQTGNTNIRSYFTAAPQQTADEIAASELQDMPIDAFFDSNDGFDDLILSAEANIPVTTST
TTSRTTPQTRTETVLSDDLAAAFNDDDDDMFADFQWGSGNQNVNKLKAQRQSNTTTTTSA
SAASARNRAEIDESFSEWLQDDNDLNDDDYVWGSAAKSARLSEVGPSLKKFKSQNTETTN
DDSYGWGSTSRVVTEETALNVKCTGCHQPAKELSVKKDGPNKGRMFFVCAKSGNPCKFFQ
WADEIEQQNHSSNAQTSTSSTSNWGSSANSRTSISTDNNSNWGSSSSSNRINTTSTNWGS
RDADIPVSKEQVNCNCNKPASSLTVRKEGPNKGRDFYACANRDKSCGFFQWADQTENTEQ
SSTYSRADTTSTNWGSGSSSNRANTANSSGWGSREFESTDNAEKVNCNCNKPANSLTVRK
EGPNKGRNFYACSNRDQSCGFFQWAEQTEDDSQRSWGSSSSASTSANFKPVANKKDDSKT
APKGRKCGLCRQEGHSRQKCPRKGEFEF
NT seq
4047 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaggtattaaaatgttataaattcttttcgtctaaaagatgctacgctaaaaag
gacctaaacatagaaatgaagtacctaaatgtggcagagaaaaatgatgcggcgaagaca
attgctggtcaattgtccaatggaactgccagaagacgtgaaggcctttcggtttataat
aaaatttatgaatttgaagcaacagttctgggtagaaagagtaaaatggtaatgacttcg
gtgtcgggacatttgctgacattcgaatttctaagttcttatcgaaattggaataacgtt
gatccacaaagtctattcgatgcccccgtacgtaaagcttgcagtgaaaatttcgcagct
attaaacgtacactggaacgggaggtacgcagttgtaatggtttaatcgtctggacagat
tgtgatcgtgagggcgagaatattggttttgagattatagatgtatgtcgagctgttaag
ccgaatattacggtttatagagcaattttctccgaaattactaaagcttcggttaataga
gccctacaaaacttaacacagccggacaaacgtcaaagtgatgcagtggatgtgcgatcc
gaattggatttaaggacaggagcggctataacacgtttccaaacgatgcgtttacaaaga
ttatttcccgagaaaatatctgataagttgatttcttatggcagttgtcaaatacccaca
ttgggttttgtggccgaacgttataaagaaattgaggcatttgtgtcggaacctttttgg
aagattaaagtaactcataccatagaagatttaacggtagaattcctttgggcccgcaat
cgtctcttcgacaaacaggcatgtgaagactattatcttctggttatagcgaatcccaca
gctactgtagaaagtgtaacggtgaaacctaaaagtaaatggcgacccacacctttggat
acggtggaattggaaaaattaggttcacgaaaattgaaattatccgccaaggaggttatg
actatagcagaaaagttatataccaagggtattatcagttatccacgtacggaaacaaat
atgttttccaaggaaattgatttaaaatctttagtagagcagcaaacaggtcatggagtt
tggggttcatttgctcaacgtgtagcggaatggggaccaaatccaagaaatggcaataaa
tctgatcaggctcatccaccgatacatcccactaaaatggtgccaaatttagatggcaac
gagggtcgtgtgtatgagttaatttgccggcattttttggcatgtgtcagtaaggatgcc
actggttccgaaacgatagtaacaatttccattgaaggtgaaaagttcacagctacaggt
ttagttatttatgaacgcaactacctagacgtttatatatacgataaatggaatgccaaa
caaatacataaatacgaacagggacaaaagtttgaaccaacagaaataacaatgccagaa
ggtgcgaccacagcaccaccgctcctaacagaagctgatttaatagcactgatggaaaaa
catggcattggaacagatgccacgcatgcggaacatattaataccattaaagaaagaggt
tatattggagtggtggataaaggatgtctagtgccaggagttataggcatgggtctctat
gagggatatgatgctatggaattggctttagctaaacctatgttaagagctgaattcgaa
caagatttaaaaaagatttgtttaggtgaaaaggaccccaaaacagtattgcgtgagcaa
attgttaaatataaagaagcctataaacaaattatggacaaaattagtgcaatggatgaa
aaaatggcccaacgtattttagaaaccccaaaccagcataatactaacaacactaactct
aatagcaacaccgaaagtcgttcaggagcctcagaaaatcaaaatcgtttgcaagaaata
ttcaaatgtcccaaatgttccattgctcccatggctttaaaacctaaaaagaatcaaacc
ggttttcttatcggttgtctaaattttcccgattgtaaaaattgcatttggtggccagat
gaatgtaaagaaccccatgctctagatgaaacctgcaataaatgtggttctgaaatgaaa
ttaataaaatttaaattttcaaatccctatcataaagccatgtttaattgtccttctggt
tggtataaaatctgtctacgatgtgatgaacaatttcgtaatatattcaatataaatttg
gatagtgttaaaagagttggtccgatagtagcagacatttcatctatacctattaattat
ggtgtaacaactcaaccagcgcccgcggcaggatcaaacaataacacaggcggtaaaaaa
tctaaaagtacaaccactaaaacaaagacaactaatgatgctgctggagaaactgaaact
aaagctaagaaaacgcgtaaaccttccacaaaaacaacaactacaagtgctaatcaaaag
aaacaaactggtaatacgaatatacgttcctattttacggcagctcctcaacaaacagcc
gatgaaattgctgcctctgagctacaagatatgccaattgatgcctttttcgatagtaat
gatggattcgatgatttaatattatcggccgaagcaaatataccagtaaccacatccacg
acgacgagcagaacaacaccacaaacccgtaccgaaaccgtattaagcgacgatttagca
gcagcatttaatgatgacgatgatgatatgtttgcagattttcaatggggttctggtaat
caaaatgtcaataaactaaaggcacaaaggcaaagcaatactacaacaacaacgtctgca
tcagcggcttcagctagaaatagagcagaaatagatgaaagttttagcgaatggctgcag
gatgataatgatctcaatgacgacgattatgtttggggtagtgctgctaaaagtgctaga
ctgtctgaagtaggtccttccttgaaaaaattcaaatcacaaaatacggaaacaacaaat
gatgatagttatggctggggttcaactagtcgagtagttactgaggagactgcgctcaat
gttaaatgcacgggatgtcatcagccggccaaagagttatcggttaaaaaagatggtcct
aataagggtagaatgttttttgtgtgtgccaaaagtggtaacccttgtaagtttttccag
tgggccgacgaaattgaacaacagaatcattcatctaatgcacaaacctctacaagtagc
actagcaactggggttctagtgctaacagtaggacaagcattagtacagacaataacagc
aattggggttccagtagcagtagtaatagaatcaataccactagcactaattggggttct
agagacgcggacataccggttagtaaagaacaagtaaattgtaattgcaataaaccggcc
agtagcttaacggttcgcaaagaaggccctaataagggtagagatttttatgcttgtgct
aatcgtgacaaatcttgtggtttctttcaatgggccgatcaaactgaaaatactgaacaa
tcaagtacatattctagagcagatactacctctacaaattggggctcaggtagcagtagt
aatagagctaatactgccaattccagtggttggggttcaagagaatttgagtcaacggat
aatgcagaaaaagtaaattgtaattgcaataaacctgccaatagcttgacggtaagaaaa
gaaggccctaataaggggcgaaatttttatgcctgctccaatcgtgatcaatcgtgtggt
ttctttcaatgggctgaacaaactgaagatgacagtcaacgttcttggggcagtagctca
tctgcctccactagcgctaattttaaaccagtagcaaataaaaaagatgattctaaaaca
gctccaaagggtcgtaagtgtggtttgtgtcgccaggaaggtcattcgcgacaaaaatgt
cctcgtaaaggagaatttgaattttaa
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