Lucilia cuprina (Australian sheep blowfly): 111688221
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Entry
111688221 CDS
T06013
Name
(RefSeq) probable cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
lcq
Lucilia cuprina (Australian sheep blowfly)
Pathway
lcq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lcq00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111688221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcq03019
]
111688221
Messenger RNA biogenesis [BR:
lcq03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
111688221
U7-dependent histone pre-mRNA processing factors
111688221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
111688221
NCBI-ProteinID:
XP_023306475
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Position
4:complement(92983140..92986800)
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AA seq
752 aa
AA seq
DB search
MTSIIKLHTVSGAMDETPPCYILQIDEVKIMLDCGWDEKFDANFIKEVKRHVHTIDAVLL
SHPDVYHLGALPYLVGKLGLNCPIYSTIPVHKMGQMFMYDLYMSHFNMYDFDLFSLDDVD
AAFDKIIQLKYNQTVNLKGKGYGIAITPLPAGHMIGGTIWKILKVGEEDIVYATDFNHKK
ERHLNGCELERLQRPSLLITDAFNALYQQARRRARDEKLMTNILQTLRGNGNVLIAVDTA
GRVLELAHMLDQLWKNKESGLMAYSLALLNNFSYNVIEFAKSQIEWMSDKLMKSFEGARN
NPFQFKHMQLCHSLAELAQLPGPKVVLASEPDMESGFTRDLFVQWAGNPNNSIIFTSRTS
QGTLAMDLVENHTPGRKIEIDIRRRIELEGAELEEYLRIQGEKVNRLIVKQDAEEESSSD
SEDDIEMSIITGKHDIVIRPEGRQHTGFFKSNKRHHVMFPFHEEKIKCDEYGEIINLEEY
RIADVAYDYPMDDNKENVKKEEIKGEKSKTDDEVQLLEKPTKCISQRKTIEINAQIQRID
FEGRSDGESMLKILSQLRPRRVIVVHGTEEATQAVAKHCEQNIGARVFTPHKGETIDATT
ETHIYQVRLTEGLVAQLQFQKGKDAEVAWIDARIGVRTQAIESTNTTQNNNADNDVTETS
SSDEKTLTLESLENDEIPVHNSVLINELKLSDFKQILMRNNINSEFSGGVLWCCNGSLAL
RRIDTGKVTMEGHLSEEYYKIRELLYEQYAIV
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgacttctattataaaactccacactgtttcgggggcaatggatgaaacaccaccctgt
tatatattacaaatcgatgaagtcaaaataatgttggactgtggttgggatgaaaagttt
gatgcaaattttattaaggaagttaaaaggcatgtccacacaattgatgctgttttattg
tcccatccagatgtttatcatttgggtgctttaccctacttggtaggcaagttgggttta
aattgtcccatttattctaccattcctgtacataaaatgggtcaaatgtttatgtatgat
ctttatatgtcacactttaatatgtatgattttgatttgttctcattggatgatgtggat
gctgcttttgataaaattatacaattgaaatacaatcagacggttaacctgaaaggtaaa
ggttatggcatagccataacacccctaccagcgggacatatgattggtggcactatatgg
aagatattaaaagtgggcgaagaagatattgtctatgccaccgatttcaatcacaaaaaa
gaacgtcatttgaatggttgtgaattggagcgtttacaaaggccctcactacttataacg
gatgcttttaatgctttgtatcaacaagcccgacgtagggctcgtgatgagaagcttatg
acaaatattttacaaactttgcgaggtaatggcaatgttctaatagctgttgatacagcg
ggacgtgttttggaattggctcatatgttggatcagctgtggaagaataaagagtccggc
ttaatggcctactcattggctttgctgaataacttctcctataatgtgatagagtttgct
aaatcccaaattgaatggatgagtgataaattaatgaaaagttttgaaggagcacgcaat
aatccctttcaattcaagcacatgcaattgtgccacagtttggctgagttggctcaatta
cccggccccaaggtggtgttggctagtgagccggatatggaaagtggctttaccagggat
ttatttgtacagtgggcgggtaatcccaataatagtataatatttacctcaaggacctct
cagggcactctggccatggatttagttgaaaatcatactccgggaagaaaaatcgaaata
gacattagacgtcgcatagaattagaaggtgctgaactagaggaatacttacgtatacag
ggtgaaaaagttaatagacttatcgtgaagcaagatgccgaagaagaaagtagttcggat
tcagaagacgacattgaaatgagtattattacgggaaaacatgatattgttataagaccc
gagggcagacaacataccggattctttaagtcaaataaaaggcatcatgtaatgtttccc
tttcatgaggagaaaatcaaatgtgatgaatatggtgagataatcaatttagaagaatat
cgcatagccgatgtagcctatgactacccaatggatgataataaggaaaatgtaaagaaa
gaagaaatcaagggagaaaaatcaaaaacagatgatgaggtacaactgctggaaaaaccc
acaaaatgtataagtcaacgtaaaactatagaaataaatgcccaaatccagcgtatagac
tttgaaggtcgctctgatggtgaatctatgttaaaaatcttatctcagttaagaccgcgt
cgtgttatagttgtgcatggtactgaggaagctacacaggcggtagctaaacattgtgaa
caaaatataggcgcccgagtttttacaccacacaagggagaaactattgatgccaccacc
gaaacacatatttatcaagtacgtctcactgaaggcttagtagctcaactacaattccaa
aagggcaaagatgccgaagtggcctggatagatgctcgcattggtgtacgaactcaagct
attgaatccactaatacaacacaaaataataacgctgataacgatgtcacagagacgagc
agtagtgatgagaaaactcttactttagagtctttggaaaatgatgagatacctgttcac
aattcagtcttgattaatgagctaaaactttccgatttcaaacaaattctaatgcgtaat
aatattaattcggaattttctggtggtgttttatggtgctgcaatggttctctggcatta
agacgtatcgatactggtaaggtgactatggaaggacatttgtcggaagaatattataaa
atacgtgaattgttgtatgaacagtatgccattgtctaa
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