Lucilia cuprina (Australian sheep blowfly): 111688265
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Entry
111688265 CDS
T06013
Name
(RefSeq) SR-related and CTD-associated factor 4 isoform X2
KO
K13191
RNA-binding protein 16
Organism
lcq
Lucilia cuprina (Australian sheep blowfly)
Brite
KEGG Orthology (KO) [BR:
lcq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcq03021
]
111688265
03041 Spliceosome [BR:
lcq03041
]
111688265
Transcription machinery [BR:
lcq03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
111688265
Spliceosome [BR:
lcq03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
111688265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
111688265
NCBI-ProteinID:
XP_023306518
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All DBs
Position
6:complement(8452555..8468515)
Genome browser
AA seq
1225 aa
AA seq
DB search
MENVVAFNNELSGLYESKPPISKAKMAAITRAAMRAIKFYKHVVQSVEKFILKCKPEYKV
PGLYVIDSIVRQSRHQYGAEKDVFAPRFARNMKETFANLFRCAPEDKSRIIRVLNLWQKN
NVFAPDVIQPIFDLADPNHPIYSMPPPGAAASSSGPSGSGNISIGDISASQANGGLNTSG
SSMDISMGGGVGSAGSQADDKLPPSGLADLSNNNLKQLLNDPNVLRQLQTLQNFTKFKQD
DKQQHNLRLQEEAFEKHLQNVLKNSASSSSGNQDANDFNKEVEFVSEEQKIEVINLDGND
SRSPTPDRDRYKRRRSRSRSRSRDRGGRNRRGRSRSRSRSRSPRSNRRRNSRDRERTNRD
KEKDREHERERRKKGLPEIKKDHLSVCSTTLWVGHLSKLVYQEELSDTFGEYGDIVSIDQ
IVPRGCAFIVMNRRQDAHKAMQSLKNHKLQGRAITISWAAGKGVKSKEWKDFWDLELGVT
YIPWNKLDENTDFDALEEGGMFDEDSMPSWMKEKINKMKSLKEGGVSGEHVNLPGAAGLS
GPPPVLPPGGNPAMMFGIDTTQPPPGPPPTGGPPPMLPMVPGQFSMAPPMGGPPRMLGPP
HMGMPISGIHMPPNIVPPHAMMMMPGFGMPGPGGAPPMGPPHMPPMAGPHPTQFPPPPGG
PPTSTMASNVSSDDQMDIEMEDEEGATVASANPPAASGSGMNFSQPPPAFAGGSGENSAA
AAGEPFSRERNRGGAGGSRWGGRGGGVGPDEEVNDGRWRENGGQGGPHNFGDSGPRNAGP
HRPDFMNDFDKRGGPGPRGGGGGPNFNGGGGDFHPNMQNRFNQPTNLMQMRIPPPNAFNQ
RGGPGGGGPPMFMRGGQGGPGGQGGRQQGPGFFNRNNPFDRDMNEGFGGRGRGRGGGRGG
GRGGRGGAFGGGRDGMPGGGGGPHGGNWSDEEGDEGGFKRRGGGIGGNRFRDREGSADRF
NMRDNNTRGGRRGPNGPARERNDSERDNRAGRGPSAGSGGRRMSRDENNKKKARICDTEE
DWDRELEDYDGKNDKKQLAEQTAKTSEDISSIAKNTADNSSKNEADQMDKPALQANDQKT
DAKEIKEDNETKASKPQTVNMPPAAAAAVATEEGDKNTKSATPLYDELPAPKAANKKTNE
TTTTNAADTVKPPAVETAKTATAPAAAVAEKPTETKAEVEQKPAATNNTSNNNKAIESVT
TSSNETVVTADSKSETVAAETAAEA
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacgtagtggcgtttaataatgagctttctgggctctacgaaagtaaaccgcct
atatcaaaggctaaaatggctgccatcacaagagctgcaatgagagccataaaattctac
aaacatgttgtacaaagtgtggagaaatttatattgaaatgtaaaccagaatataaagta
cccggtctatatgttatcgattcgatagtgcgacaatctcgtcatcaatatggtgctgaa
aaagatgtatttgcgccacgtttcgcccgcaatatgaaagaaacttttgcaaacttattt
cgttgtgctccagaagataaaagtcgcataatacgtgtattgaatctatggcaaaagaat
aatgtttttgctcccgatgttatacagccaatattcgatttagccgatccaaatcatcca
atttactcaatgcctccaccgggtgctgcagccagttcatcgggtcccagtggttcgggt
aacataagtataggagatatatcagcatctcaagcgaatggaggtttaaatacttctggt
agttcgatggatataagtatgggcggtggtgtaggtagtgctggttcccaagcggatgat
aaattaccacccagtggtttggctgatttatcgaataataatctaaaacaattattaaat
gatcccaatgttttacgtcaattgcaaacattgcaaaattttactaaattcaaacaagac
gacaagcaacaacacaatttacgtttacaagaagaggcttttgaaaaacatttacaaaat
gttttaaagaattcagcctcttctagttctggtaatcaagatgctaatgattttaataaa
gaagtggaattcgtttcggaggaacaaaaaattgaggttatcaatttggatggcaatgat
tcacgtagtcccacaccagatcgtgaccgctataagagacgtcgcagccgtagtcgttcc
cgttcacgtgatcgtggaggtcgcaatcgtcgtggacgtagccgttctcgttcacgtagt
cgttcaccacgttcgaatcgccgtcgcaattccagggatcgtgagcgtaccaatcgtgac
aaggaaaaggatcgtgagcatgaacgtgaacgccgcaaaaagggtcttccagagattaaa
aaggatcatttaagtgtttgcagtaccacattgtgggtgggacatttatcaaaacttgtc
tatcaagaggaattatctgatactttcggtgaatatggtgatattgtgagcattgatcaa
atagtaccgcgtggttgtgctttcattgttatgaatcgtcgccaagatgcccacaaagct
atgcagagtcttaagaatcataaactgcaaggtagagccataaccatatcatgggcagcc
ggtaagggtgtaaagagtaaggaatggaaagatttctgggatttggagctgggtgttaca
tatataccatggaataaactggatgagaacaccgactttgatgcactcgaagagggtggt
atgtttgatgaggattccatgcccagttggatgaaggagaagattaacaagatgaagagt
ttgaaagaaggtggtgttagtggtgagcatgttaatttgcctggtgcggccggtttgtcg
ggaccaccgcctgttttaccacccggtggaaatccagctatgatgtttggcatagataca
acacagccaccaccaggacctccacctactggtggtccaccacccatgttacccatggta
ccgggtcaattctcaatggcacctccaatgggcggaccgccgcgcatgttgggacctcct
catatgggcatgcctatatctggtatacacatgccgccgaatatagtgcctcctcatgct
atgatgatgatgccgggctttggtatgccgggaccaggtggtgcccctccaatgggtcct
ccacatatgcctcccatggctggtccacatcccacacaatttccaccaccacccggtgga
cccccaacctcaaccatggcttccaatgtgtccagtgatgatcagatggatattgaaatg
gaagatgaggaaggtgccacagtggcttcagcaaatccaccagcagcatctggtagtggt
atgaatttctcacaacctcctccggcatttgcgggtggaagtggtgaaaattcagctgca
gctgcaggagaaccgttttcgcgtgaacgcaatcgtggcggcgcgggtggttctaggtgg
ggaggacgtggaggcggtgtcgggcctgatgaagaggtcaatgatggtagatggcgggag
aatggtggccaaggaggtcctcataacttcggcgactcaggaccacgtaatgcaggacca
cataggcctgattttatgaatgattttgacaaacgtggtggacccggtccacgtggtgga
ggtggtggccctaattttaatggtggcggcggcgattttcatcccaacatgcaaaatcgc
tttaatcagccgacaaatttaatgcaaatgcgtatacctccaccaaatgcgtttaatcaa
agaggaggtccaggcgggggtggaccacccatgtttatgcgtggcggtcaaggtggtccc
ggtggacaaggtgggcgacaacagggacctggatttttcaatagaaacaatccatttgat
cgcgatatgaatgaaggctttggcggtagaggccgaggacgcggtggtggccgcggaggt
ggtcgtggcggtagaggtggagcctttggtggtggtcgtgatggtatgcctggtggtggt
ggtggtccccatggcggcaattggagtgacgaagaaggcgatgaaggtggttttaaaaga
cgtggtggaggtattggtggcaatcgcttccgtgatcgtgagggaagtgctgatcgcttt
aacatgcgtgacaataatactagaggtggtcgtcggggacccaatggcccggcacgtgaa
cgcaatgacagtgaacgagacaatcgggctggacgtggtccatcagctggcagtggtggt
cgtcgtatgtcacgagatgagaacaacaagaaaaaggcacgtatttgcgataccgaagaa
gattgggatcgtgagctagaggattatgatggcaaaaacgataagaaacaattagccgaa
cagacagccaaaaccagcgaagatataagtagtatagctaaaaataccgcagataacagt
agtaaaaatgaggctgatcaaatggataagccagcgctgcaggccaatgaccagaaaaca
gatgctaaggagattaaagaggacaatgaaactaaagcgtctaaacctcaaacagttaac
atgccaccagcagcagcagctgcagtagccacagaagagggtgataaaaatactaaatct
gcaacaccactttatgatgaactaccggcacctaaggccgccaataagaaaactaatgaa
acgacgacgacaaacgccgccgacacagtgaaaccaccagcagtagagactgctaaaaca
gcaacagctccggcagcagcagtagctgagaaaccaacagaaactaaggcggaagttgaa
caaaaaccagcagccactaataacaccagcaacaacaacaaagcaatagaatctgttaca
acaagtagtaatgaaacagtggtgactgctgacagtaaatctgaaactgttgctgctgaa
actgctgcagaagcttaa
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integrated database retrieval system
