Lucilia cuprina (Australian sheep blowfly): 111689289
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Entry
111689289 CDS
T06013
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
lcq
Lucilia cuprina (Australian sheep blowfly)
Pathway
lcq04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lcq00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
111689289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcq04131
]
111689289
Membrane trafficking [BR:
lcq04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
111689289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
TPR_Vps41
Clathrin
zf-RING_2
zf-rbx1
ANAPC4_WD40
zf-RING_16
Beta-prop_EML_2
zf-C3HC4_2
WD40_CDC20-Fz
zf-ANAPC11
zf-RING_Vps41
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
PQQ_2
Beta-prop_WDR3_1st
zf-RING_UBOX
zf_RING_Vps8
MutS_III
Motif
Other DBs
NCBI-GeneID:
111689289
NCBI-ProteinID:
XP_023307529
LinkDB
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Position
5:40402598..40407491
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AA seq
1263 aa
AA seq
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MNELKAPSLNSLLGSDRGSTDSLLAESLLDMEELDDVEYSIPPTGALPSLETVLSEFEAD
SDIASELGIPPPTPTPSIADESSVRMSGSGGGGSIMRYTMLQGISTQVSSAADRINAGMA
SSCCVCSHYYAVGTSHGHILNFDITQTLRWAHQDKNGQGAVSSLSYNPECNRLLAGFARG
LVIMLDTQSGDVMRQLFDVVTPNTGVLHVKWTSRAAMALAADSGGSVWSLSFTRKLGVRG
CSTRCLFSGARGEVCAVEPLLSQTNEHHDLDQYCIVALATLSKYFIVTIRPRLKVIKYHL
LQGPPDCLPVLAWQMVLIQAADTSRSVDPVLVVGRGNQLFFHQLFISHGRITLLLLRHIT
MQTNLLSAHWLGPKCVGCIDTSEILHLLDVRTSKELECIDLANAGMVYGSAQFKGLATGG
NVSPALALAGTHACYNSLACRGVQLYVLGAKSMHSIGVRTWMERITYLVKNQRWQEACDL
ALDGYKAAGERPKRKQQAKERIIMLFKEYIAASARAPDYCLGAIIKCLITVGELELLWTQ
LWERLQNKELFLHHITAHIENDDIHRVNPIISQALVEYWLKISPSQLEEIILKMDWTCLD
LNQVLKAAKKYKLYKAQIFLNANALHDYTVSLTELIPLLDYEHPDLGNCLLVYISSCLAG
RGYPQGEIPEELRQNVKHDVLRCLTSLHSNTSEPNELPYPYLRALLKFDIRETLNVISLA
FQEKEFNCELGFQHRKRIINILLEIMTPENNTWSEIGCLLNFIAQQISQSCLPVDTQLLE
KVLNYLSKESIENESARLHSERENAWHELLVNNCLDAITNDEEQLELAKKAHCHYVEEYL
LEKLQRYDNILECYLNNPLRHETMFVYMERHIKNEERKIYEQLRKHIKRLLTIDAQETTR
IVDLYFNKKIKELLELVADDEQILFTFLKHLQQRNENLAQEQKLKLLELLCKFEPLEVEE
FLKKTEGYHSQAALKLVQQYQLLEAAIFLAEKLFDYKLAFSISMDILKSTKTENMAEYAQ
KVSALCARSSMCSKSCLTAKERETLWMDLLKFILPLEELKSITKTMLHEASQHVDLPNLV
QLIMNTHNVSGSFGDIKELLLSMLNQSKQETHAMEISLKIMEKELAQEFHKYHKKATRGL
WITMMRCVVCQQRLYNQSAILILGSCGHAMHEQCSQEFLTTNQNENPNNVLTKNNSEQSS
MPEKCLECPYCLNQIDIRIFDKPLQLAKPSHNVINYNSNTNGNFKASSPELGVLQLKSPP
RKF
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaattaaaggctccatccttaaattccctattgggttcggatcgcggttccacg
gatagtttgttggcagaatcactactcgatatggaagagttggatgatgtggaatactct
ataccacccactggcgctttaccttccttggaaactgttttaagtgaatttgaagcggat
tctgatatagcctcagagttgggcatacctccccccactcccacaccttctatagccgat
gaaagcagtgtgcgtatgtcgggttcaggcggtggaggcagtattatgcgttataccatg
ctgcaaggcatttctactcaagtttcttcggccgcggatcgtattaatgccggcatggct
tcttcttgttgtgtgtgtagtcattactatgccgtaggtacttctcatggccatatactc
aatttcgatatcacacaaaccttaagatgggctcaccaagataaaaatggtcaaggagct
gtttcctctttgtcctacaatccagagtgtaatcgtcttttggccggttttgctcgtggt
ctagtgataatgcttgatactcaatcgggtgatgttatgcgtcaattattcgatgtggtt
actcccaatacaggagtactacatgtcaaatggacttcgcgagctgccatggctttagca
gccgattctggcggttcggtatggtctttgagttttacccgtaagctaggagtgcgaggc
tgctctacacgttgtctcttttccggtgctcgtggtgaggtatgtgctgtggaaccttta
ctaagtcagaccaatgaacatcatgatttagatcaatactgtatagtggctttggccact
ttatcaaaatatttcatagtgaccataagaccgagattaaaggttattaaatatcatttg
ctgcaaggaccaccagattgtttgcctgttctggcctggcaaatggttttaatacaagct
gccgacacctccagatctgtagatcctgtactcgtagtgggtcgtggcaatcaactattt
ttccatcaattgttcatctctcatggacgtataactttactgcttttgcgtcatataacc
atgcaaacaaatctactgtccgcccactggctgggacccaaatgtgtgggttgtatagat
acatcggaaattttacatttattagatgtacgtaccagcaaggaattggaatgtatagat
ttggccaatgctggtatggtttatggttcggcacaatttaagggtttggctacgggtggt
aatgtttcgcccgctttagctttggctggtacacatgcctgctataattctttagcttgt
cgtggggtacagctgtatgttttgggagcaaaatcaatgcattcgattggtgtaagaaca
tggatggaaaggataacatatttggttaaaaatcaacgttggcaggaagcctgtgattta
gccttagatggctataaagcagcaggcgagcgtcccaaaaggaaacaacaagccaaggag
cgtattattatgttatttaaggagtatatagcggcttctgctagagcccccgattactgc
ttaggagccattatcaaatgtctcataaccgtaggagagttagaattgctatggacccaa
ctatgggaacgtttacagaacaaagaactattcctacaccatattaccgcacatatagaa
aatgacgatattcatcgtgttaatcctattatttctcaagctctagtagaatattggctt
aagatatcaccctcacaattagaagaaattatattgaaaatggactggacctgtttggat
ctgaatcaagttcttaaggcggccaaaaaatataaactctataaagcacaaatattccta
aatgctaatgctttgcatgactacactgtttctttaaccgaacttatacctttgctggat
tacgaacatcccgatttgggtaattgtctattggtttatatttctagttgtttggccgga
cgtggttatcctcagggtgaaatacccgaggaactaagacaaaatgttaaacatgatgtt
ttacgttgtttgacatcgttgcattccaatactagtgaaccgaatgaattgccctatccc
tatttgagggccctattgaaatttgatatacgcgagactttgaatgtgatatcgttggct
tttcaggagaaggaattcaattgtgagctaggctttcagcatcgcaagagaattataaat
atattgttggaaattatgacgccggagaataatacgtggtccgaaattggttgtctactc
aatttcattgcccaacagatttcacaatcctgcttgcctgtcgatacacaactcctggaa
aaagtcctcaactatttatctaaagagtcgatagaaaatgaaagtgctcgcctacattcc
gaacgtgagaatgcttggcatgagttgctggtcaataattgtctcgatgccataactaac
gacgaagaacaattggaattggccaaaaaggctcattgtcattatgtggaagaatattta
ttggaaaaactacaacgttatgacaacatactcgagtgttatctcaataatccgttgaga
catgaaaccatgtttgtatatatggaacgacacattaagaatgaagagagaaaaatctat
gaacaactacgtaaacatatcaaacgtttgctgacaatagatgcccaagaaacgacacgt
atagtggatttatattttaataagaaaatcaaagaattgctagaattagtggcagatgat
gaacaaattttgtttacatttcttaaacatctacagcaaagaaatgaaaacttggcccaa
gaacaaaaactaaaacttttggagctgttgtgtaaatttgaacctttagaggtggaagag
tttttaaagaaaactgaaggttatcattcccaggccgctcttaaattggtgcaacaatat
caactcttagaggcagccatatttttggcagagaaattatttgattataaattagctttt
agcatttctatggatattttaaaaagtaccaaaacagagaatatggccgaatatgcacaa
aaagtctcagctttatgtgctcgctcctctatgtgttccaaatcttgcctaacagccaaa
gaacgtgaaacattgtggatggatttacttaagtttattttgcccttagaagagcttaag
tccataactaaaactatgctgcatgaagcctcacaacatgttgatctgcccaatttagtg
cagctcatcatgaatacccataatgtatcgggaagttttggtgatattaaggaattactt
ttgagtatgttaaatcaatcaaaacaagaaactcatgccatggaaataagtctaaaaata
atggaaaaagaattggcacaagaattccataaatatcataaaaaagctacacgtggcctc
tggataaccatgatgcgttgtgtcgtttgccagcaacgtttgtataatcaatcggccata
ttgattttaggctcctgtggtcatgccatgcatgaacaatgttcccaagagtttttaaca
acaaaccaaaacgaaaatcccaacaatgttttgactaagaacaacagtgaacaatcatca
atgccagagaagtgtttagaatgtccttactgccttaatcaaatcgatattaggatattt
gataagccgttacaattagccaaacctagtcataatgttattaactacaatagcaatact
aatggaaattttaaagccagtagcccagaattgggagttttacaattaaaatcaccacct
agaaaattttga
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