Lucilia cuprina (Australian sheep blowfly): 111689858
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Entry
111689858 CDS
T06013
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
lcq
Lucilia cuprina (Australian sheep blowfly)
Pathway
lcq03030
DNA replication
lcq03410
Base excision repair
lcq03420
Nucleotide excision repair
lcq03430
Mismatch repair
lcq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111689858
03410 Base excision repair
111689858
03420 Nucleotide excision repair
111689858
03430 Mismatch repair
111689858
03440 Homologous recombination
111689858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcq03032
]
111689858
03400 DNA repair and recombination proteins [BR:
lcq03400
]
111689858
Enzymes [BR:
lcq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
111689858
DNA replication proteins [BR:
lcq03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
111689858
DNA repair and recombination proteins [BR:
lcq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
111689858
MMR (mismatch excision repair)
DNA polymerase delta complex
111689858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_2
divDNApol
DNA_pol_B_exo2
Motif
Other DBs
NCBI-GeneID:
111689858
NCBI-ProteinID:
XP_023308091
LinkDB
All DBs
Position
5:complement(12886513..12890260)
Genome browser
AA seq
1102 aa
AA seq
DB search
MSNFANKRKFAGAGAAAATNGTANGAPKKPRNYDDDDDDMGGGGGFEVDFNNDDMDMTQL
MGEGPENQQTSVKWSRVDPPELDCETDALIFQQIDIENYIGAPLPGMPGARMGPVPVIRM
YGITMEGNSVCCHVHGFCPYFYLAAPKGFEQKHCHELRSALDKKVLADMRGGNKDNVQEA
VLSVELIERLNIYGYQGDVKQKYIKITLSLPKFVAAASRLLKKEVIYNEFDFQDCRAFEN
NIDFDIRFMVDCDVVGCNWIELPAGSWRQRGRNSKPLPESRCQLEVDVAFDKFISHEPEG
EWSKVAPFRILSFDIECAGRKGIFPEPKMDPVIQIANMVIRQGDPEPFIRNVFTLKTCAP
IVGSQVLCFDTEKELLDKWSSFVREVDPDILTGYNINNFDIPYLLNRAAHLKVQNFEFLG
RIKNIRSVIKEQVLQSKQMGRRENKYVNFEGRVPFDLLFVLLRDYKLRSYTLNAVSYQFL
QEQKDDVHHSIITDLQNGDEQTRRRLAMYCLKDAYLPLRLLDKLMSIVNYMEMARVTGVT
LESLLTRGQQIKVLSQLLRKAKTKGFIMPSYSSQGSDEQYEGATVIEPKRGYYADPISTL
DFASLYPSIMMAHNLCYTTLLQPGMKDKLGLSDDDYEKTPSNNTFVKASVRRGLLPEILE
SLLAARKRAKNDLKVETDPFKRKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISGSVT
SYGRTMIELTKNEVESHYTRANGYENDAVVIYGDTDSVMVNFGVKSLERSMELGKEAADL
VSAKFVSPIKLEFEKVYYPYLLINKKRYAGLYFTRPETYDKMDCKGIETVRRDNSPLVAN
LMNTCLQKLLIERNPDGAVEYVKQVISDLLCNRIDISQLVITKELAKTDYAAKQAHVELA
AKMKKRDPGTAPKLGDRVPYVICAAAKNTPAYAKAEDPLYVLENSVPIDANYYLEQQLSK
PLLRIFEPILGDKAESILLKGEHTRTRTVVTSKVGGLAGFMTKKSSCLGCKSLMPKGYEN
EPLCPHCKPKMGELYMKEVVAKRQMEEKFARLWTECQRCQGSLHEEVLCSNRDCPIFYMR
QKIRMDLDTQEKRVRRFGLPEW
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgagcaattttgctaacaaacgaaaatttgcaggagctggagcagcagcagccacaaat
ggaactgcaaatggagcacctaaaaagcccagaaattatgatgacgacgatgatgatatg
ggtggcggtggtggttttgaagttgattttaacaatgatgacatggatatgacccagttg
atgggcgaaggtccagaaaatcaacagacctctgtcaaatggtctcgtgtagatcctcca
gaattagattgtgaaaccgatgctttaatatttcaacaaatagatattgaaaactatata
ggagctcctctgcctggcatgccgggtgctcgcatgggtccagtaccggttatacgcatg
tatggcataaccatggagggtaattctgtgtgttgtcatgtccatggcttttgtccgtat
ttctatttggctgcccctaaaggcttcgagcagaaacattgtcatgaacttagatcggct
ttggataaaaaggttttggctgatatgcgtggcggcaacaaggataatgtacaggaggcg
gttttaagtgtggaattgatagaacgtttaaatatttacggttatcaaggggatgttaag
cagaaatatatcaaaataactctttcactacccaaatttgtggctgccgcttcacgttta
ttgaaaaaggaagttatttacaatgaatttgatttccaggattgtcgtgcctttgagaat
aacatagattttgatatacgttttatggtggactgtgatgtagtgggttgcaattggata
gaattgcctgcaggctcatggcgtcaaaggggacgcaattccaaacctttacccgaaagt
cgttgccagttagaggtagatgtcgcgtttgataaattcatatctcatgagccggaaggt
gagtggagtaaagtggctccttttcgcatattatcctttgacatagaatgcgctggtcgc
aagggcatatttcctgaaccaaaaatggatcctgttatacaaattgccaatatggtgatt
agacaaggtgatcccgagccttttatacgcaatgttttcactttgaaaacctgtgctccc
atagtgggcagccaggttttatgtttcgatacggaaaaagaactactagataaatggtct
agttttgtgcgtgaggtagatccagatatattaaccggttataatatcaataattttgac
attccctatctgctgaatcgcgccgctcatctaaaggtgcaaaactttgaatttttgggt
agaattaagaatatacgttcggttatcaaagaacaagttctgcaatccaaacaaatgggt
cgccgtgaaaataaatatgtaaattttgagggcagagttccctttgatttgctttttgtc
ctattaagagattacaagctaagatcctataccctcaacgctgtgagttatcagttttta
caagaacaaaaagatgatgttcaccatagcattattaccgatttgcagaatggagatgag
caaacacgtcgtcgtttggccatgtattgccttaaggatgcctatttgcctttaagacta
ctcgataaacttatgtctattgtcaactatatggaaatggccagggtaacgggagttacc
ttagaatctctactgactagaggccaacagattaaggtgttgtctcagttgctgcgcaaa
gccaaaactaaaggttttattatgccctcctattcctctcaaggttcggatgaacagtat
gagggcgctacggttattgaaccgaaaagaggttactatgccgatcctatatcaacactt
gattttgcttctctatatcctagtataatgatggcccataatttgtgttacactacgctc
ttgcaaccgggcatgaaagataaattgggtttaagtgatgatgattacgagaaaacaccc
tccaacaatacctttgtcaaggcctccgtacgtcgtggtttattgccggaaattttggaa
tcattattagctgcacgtaaaagagctaaaaacgatttaaaagttgaaactgatcccttc
aaacgtaaagtgttggatggtcgccagctggctttgaaaatatctgctaattccgtatat
ggttttacaggagctcaggtgggtaagctaccttgtttggagatatctggttcggttact
tcttatggtcgtaccatgattgagttaaccaaaaatgaagtcgaatctcattatacacga
gccaatggttatgaaaacgatgctgtggtaatttatggtgatactgattcagtaatggtt
aactttggcgttaaatcgctggaaagaagtatggaattgggtaaagaggcagccgatttg
gtatcggcgaaatttgttagtcccattaaattggaattcgaaaaggtgtactatccttac
ttgctgatcaataagaaaagatatgccggtctttattttacgcgaccagaaacatacgac
aaaatggattgtaaaggtattgagacagtgcgacgtgacaattctcctttggtggccaat
ctcatgaatacttgcttgcaaaagttgctaattgaaagaaatcctgatggagctgttgaa
tatgttaaacaagttatatccgatttactgtgtaatcgcatagacatttcacagttggtt
attaccaaggaattggccaaaaccgactatgctgccaaacaggctcatgtggagctagct
gcaaaaatgaagaaaagagatcctggtacagcacctaaattaggagatcgtgttccctat
gttatatgtgcagcagccaaaaatacaccagcctatgctaaagctgaagatcccttatac
gtgctagaaaacagtgtacctatagatgccaattattatttggaacaacaattatccaaa
cctttactaaggatattcgaacctattttaggagataaagcagaatcgattttattaaag
ggagaacatacacgcactcgcactgtggtcacctccaaagtaggcggtttggcgggtttt
atgacaaaaaaatcctcctgtttgggttgtaaatctctaatgcccaaaggttatgaaaat
gaaccattatgtcctcattgcaaaccaaaaatgggtgaattatatatgaaagaagtggtg
gccaaacgccaaatggaagagaaatttgcccgcttatggacagaatgccaaagatgtcag
ggttcattgcatgaagaagtattatgttcgaatcgtgattgtcccattttctatatgaga
caaaagatacgcatggatttggatacacaggaaaaacgggtacgacgttttggtttaccc
gaatggtga
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