Lucilia cuprina (Australian sheep blowfly): 111690294
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Entry
111690294 CDS
T06013
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
lcq
Lucilia cuprina (Australian sheep blowfly)
Pathway
lcq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lcq00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111690294
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcq03019
]
111690294
Messenger RNA biogenesis [BR:
lcq03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
111690294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
111690294
NCBI-ProteinID:
XP_023308529
EnsemblRapid:
LOC111690294
LinkDB
All DBs
Position
4:100766257..100768785
Genome browser
AA seq
657 aa
AA seq
DB search
MADDTNEDSWLYGTSNPDSTTNEEERIGAENANDEAGMEKVNSQELLKAENEALAAVTQG
NGLNNLPDKDDGPPGEELADFEDPAHEMEEDEEATAAATVADTTDGDEQEETKKNDEHSE
GDQDDDAEEDDDDDDSDDDINVVIGDIKAAPSTYNINKRSNLLAGASSQEKSKSTQVGKF
SIEDFEGVGSINGVAAHEFSIDSLEDKPWRKPGADITDYFNYGFNEETWRSYCERQKRFR
VAESGVGLASLTQNLNPQPERQADGNIPTGPPPGMMPSGPIPMGPLGEQIQMPPPGMMPP
TGMHQAPHQGIPPRFASIPRGPRPVSQPGTKENAIQVMTAECREYSRPGQMPPNFGAQGP
GEEAFFHEPEPFDYGYEPTQDSQWGGDNPNWVPSGIKELTPGPGNSGPPQQMSGPPGILP
TPMGVPPPQMGGPPPQLRHPHPQPPMMGGMPPPNMGMGPPPLGMMMGPGGPGGPPMHMSM
GPPRMMGPNGPPDRSEDERERRRREREWERERDRDRDRERMRRERSRSREKSRRRSKSRE
KEREKDRDKDRDKERDRDRDRDRERERDRERGEKVEDSERSDDERERRRRDRDRERDRDR
DRERSRRERSRSREKSRRRSKSRDKERERSSKTGTSSTSSSSSRSDKKKSHRKEDEE
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgatacaaatgaagatagttggctgtatggtacttctaatccagattccacc
acaaatgaggaagaacggataggtgctgaaaatgccaacgatgaagccggcatggaaaaa
gtaaattcgcaagagttgctaaaagctgaaaatgaagcactcgcagctgtaacccaaggt
aatggtttaaataatttgccagacaaagatgatggacctcccggtgaagagttagctgat
tttgaagatcctgcccatgaaatggaggaggacgaagaggccacagcagcagctactgtg
gccgataccaccgatggtgatgaacaggaggaaactaagaaaaacgatgaacattcggag
ggagaccaagatgatgatgctgaagaagacgatgatgatgatgattcagatgatgatata
aacgttgtaataggcgatattaaagctgcgcctagtacttataatataaataaacgttcg
aatctgttggctggagctagtagtcaagaaaagtccaagtctactcaggtaggaaaattt
tctatcgaagattttgaaggagtgggttcaattaatggggtagctgcgcatgaattcagt
atagattctctagaagataaaccatggcgcaagccaggtgctgatataacagattatttc
aattatggttttaacgaggaaacttggagatcatattgtgaacgccaaaagagatttcgt
gttgctgagagtggtgtcggattggctagtttgactcaaaacttgaacccacagccggaa
agacaagcagatggaaatatacctacaggtccacctcctggcatgatgccgtctggtcca
atacctatgggaccattaggagaacagatacaaatgccacctccaggtatgatgccacca
accggtatgcaccaagcaccccatcagggaattcctcccagatttgcatctatacccaga
ggcccacgacctgtgagtcaaccgggaacaaaagaaaatgctatccaagttatgacagca
gaatgtcgcgaatattcaagacctggccaaatgccaccaaattttggtgctcaaggtccc
ggggaagaagcattctttcacgaacctgagccctttgattatggatatgaaccaacacag
gattcacagtggggtggtgacaatccaaattgggtacctagtggtataaaagaattaaca
ccaggaccaggaaattctggacctccacaacaaatgtctggacctccaggaattttaccg
actccaatgggtgtaccaccacctcagatgggtgggccgccaccgcaattgcgacatccc
catccgcaaccaccaatgatgggtggaatgccaccaccaaatatgggaatgggaccacct
ccattaggaatgatgatgggacctggtggtcctggaggtcctccaatgcatatgtcaatg
ggaccgccacgaatgatgggcccaaatggccctcctgatcgttcagaagacgaacgtgaa
cgaagacgccgagaaagagaatgggaacgtgaaagggatagggatagagatcgagagaga
atgagacgtgaacgttcaaggagtcgggaaaagtctcgacggaggtcaaaatctcgtgaa
aaagagagggaaaaggatagagacaaagatcgtgataaggaaagggatcgcgatagagat
cgagatcgtgagagggaacgtgatagggaaaggggtgaaaaagttgaagacagtgaacgc
tctgatgacgagcgtgaacgaagaagaagagacagggatcgagagcgtgaccgtgacagg
gatcgtgaacgttctagacgtgaaagatcaagaagtcgggaaaaatctcgtcggagatca
aaatctcgtgataaagaacgtgaacgttctagtaaaaccggtacatcttctacatcatcg
tcctctagccgcagcgataagaaaaagtctcaccgcaaagaagatgaagagtaa
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