Lucilia cuprina (Australian sheep blowfly): 111690515
Help
Entry
111690515 CDS
T06013
Name
(RefSeq) probable ATP-dependent RNA helicase pitchoune
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
lcq
Lucilia cuprina (Australian sheep blowfly)
Brite
KEGG Orthology (KO) [BR:
lcq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcq03041
]
111690515
03009 Ribosome biogenesis [BR:
lcq03009
]
111690515
Enzymes [BR:
lcq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111690515
Spliceosome [BR:
lcq03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
111690515
Ribosome biogenesis [BR:
lcq03009
]
Eukaryotic type
90S particles
Helicases
111690515
Pre-60S particles
111690515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
AAA_22
Motif
Other DBs
NCBI-GeneID:
111690515
NCBI-ProteinID:
XP_023308778
LinkDB
All DBs
Position
4:3312739..3315677
Genome browser
AA seq
669 aa
AA seq
DB search
MSIREKLLMKKIKKREKMKKELAEKKGKQQKQQPPTKQRVKNAAPMEEDELDDDFQEMPQ
QIVKNGKPQKKKKQQQMQVVNSDSESDDEEEEMDDSDEEDQEEQSGDEEEDEEEDGSELS
DSEDEEPEHNVKQSNKEKQKKTNNAKEEQAFEELDPKAAAKALEQRDNSDRSFASLKGIV
SDATLKAIEEMGFTEMTEIQAKSLPPLLQGRDLVGAAQTGSGKTLSFLIPAVELIYKLRF
MPRNGTGVIIISPTRELSMQTFGVLKELMNHHNHTYGLVMGGSNRQVESEKLSRGVNILV
ATPGRLLDHLQNSPDFLYKNLQCLVIDEVDRILEIGFEEELKQIVNLLPKRRQTMLFSAT
QTEKIDALSKLALKKEPIYVGVDDNKDTATVSGLEQGYIVCPSEKRLLVLFTFLKKNRKK
KVMVFFSSCMSVKYHHELFNYIDLPVTSIHGKQKQTKRTTTFFQFCNAAEGILLCTDVAA
RGLDIPQVDWIVQFDPPDDPKEYIHRVGRTARGTGSSGHALLMLRPEELGFLRYLKAAKV
PLNEFEFSWNKIADIQLQLEKLISKNYFLNQSAKEAFKSYVRAYDSHQLKTIFNVNTLDL
QAVAKSFGFLVPPVVDLKVGAAKRQRPEKRVGGGGFGYYKNMNEEKSKQRVFKQVSREQL
QKKGKNFMR
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgtctattcgcgaaaagctattaatgaaaaaaataaagaaacgcgagaaaatgaagaaa
gaattggctgagaaaaaaggcaagcaacaaaaacagcagccaccaacaaaacaacgtgtt
aaaaatgcagctcccatggaagaggatgaactggacgatgattttcaagaaatgccccaa
caaattgttaaaaatggaaagcctcaaaagaaaaagaagcaacaacaaatgcaagtagta
aattcggattcagaaagtgatgatgaagaagaagaaatggatgatagtgatgaggaagac
caagaagaacaaagtggtgatgaagaagaagatgaagaggaagatggcagtgaattgtcc
gatagtgaggatgaggaaccagaacataatgtcaagcagagtaataaggaaaaacaaaag
aaaactaacaatgctaaagaagaacaggctttcgaagaacttgatcctaaagctgctgcc
aaagccttggaacaacgtgataattccgatcgctcttttgcctcccttaagggtattgtt
tctgatgctaccctcaaggctatagaagaaatgggtttcactgaaatgactgaaattcaa
gccaaatcattgcctcctttgttacaaggtcgtgatttggtgggtgctgctcaaactggt
tcaggcaaaactctatcctttttgattccagccgttgaattgatttacaaactaagattt
atgccccgtaatggtaccggtgtcataattatctcccccactagagaattgtctatgcaa
acctttggtgttcttaaagaattaatgaatcatcacaatcatacttatggtttggtaatg
ggtggttctaatcgtcaagttgaaagtgaaaaattaagtagaggtgtaaatattttggtg
gctacaccaggacgtttattagatcatttacaaaattcacccgactttttgtacaagaat
ttgcaatgtttggtcatcgatgaagtcgatcgtatattggaaattggttttgaggaagag
cttaaacaaattgtcaatttgttgcccaaacgccgtcaaactatgttgttttcggccaca
caaactgaaaaaattgatgccttgtccaagttggctttaaaaaaagaacccatttatgtg
ggtgttgatgacaacaaggatactgccactgttagtggtttagaacaaggttatatagtt
tgtccctccgagaaacgtttattggtgctgttcactttccttaagaaaaatcgcaagaag
aaggttatggttttcttttcatcctgtatgtctgtaaaatatcatcatgaattatttaat
tatatagatttgcctgttacctccatacacggtaaacaaaaacaaacaaaacgtacaaca
actttcttccaattctgtaatgctgccgagggtattttactgtgtactgatgtggctgct
cgtggtttggacattcctcaagtcgattggattgtgcaatttgatcctccagatgatcct
aaagaatacattcatcgtgtaggtcgaactgcacgtggtactggtagttctggtcatgct
ttgttaatgttacgtcccgaggaacttggtttcttgcgttatttgaaggctgccaaggta
ccattgaatgaatttgaattttcatggaacaaaatcgctgatattcaattacaactcgaa
aaacttatttcgaaaaactacttccttaatcaatcagccaaagaggctttcaaatcatac
gttcgtgcttatgattcccatcaattgaagaccatatttaatgtcaacaccttggacttg
caggctgttgcgaagagctttggttttctggtgccaccagtggttgatcttaaagttggt
gctgccaaacgacaaaggcctgaaaaacgtgttggaggtggtggtttcggttattataaa
aacatgaacgaagagaaaagcaaacaacgtgtgtttaaacaagttagtcgtgagcaattg
caaaaaaaaggtaaaaattttatgcgatag
DBGET
integrated database retrieval system
