Lactobacillus crispatus: LCRIS_00006
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Entry
LCRIS_00006 CDS
T01222
Symbol
gyrA
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
lcr
Lactobacillus crispatus
Brite
KEGG Orthology (KO) [BR:
lcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcr03032
]
LCRIS_00006 (gyrA)
03400 DNA repair and recombination proteins [BR:
lcr03400
]
LCRIS_00006 (gyrA)
Enzymes [BR:
lcr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LCRIS_00006 (gyrA)
DNA replication proteins [BR:
lcr03032
]
Prokaryotic type
DNA Topoisomerases
LCRIS_00006 (gyrA)
DNA repair and recombination proteins [BR:
lcr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LCRIS_00006 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
MutL_C
Motif
Other DBs
NCBI-ProteinID:
CBL49453
UniProt:
D5H0B8
LinkDB
All DBs
Position
6222..8702
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AA seq
826 aa
AA seq
DB search
MDENQTQDHRIKNVDLTSMMRSSFLDYAMSVIVARALPDVRDGLKPVQRRILYGMSELGV
TPDKPYKKSARIVGEVMGKFHPHGDSSIYLAMAHMAQDFSYRYMLVDGHGNFGSVDGDEP
AAMRYTEARMSKIAVEMLRDINKNTIDWQRNYDDTENEPVVLPARIPNLLVNGANGIAVG
MTTNIPPHNLTEVISGLHMLMKNPDATTKDLMKVIPGPDFPTGGIIMGRGGIYRAYESGK
GNIVVRAKTNIETEKSGRERIIVSEIPFMVNKAELVKKIADLAREKTIDGITGVRDESDQ
TGMRITIDIRRDASASVVLNNLFKQTQMQANFGMNMVAIVDGAPHFLTLKQMLQYYLDHQ
EDVVTRRTRFELAKAEARAHILEGLRIALDNIDEIVHIIRNSQSSDIAKATLISRFGLDD
KQSQAILDMRLVRLTGLERDKVEAEYKELQAKIADYKDILAKPERIDQIIYDELLDIQKR
FGDKRRTEIGASEVVSIEDEDLIEKQNILLTVTHNGYIKRMPIQEFKTQNRGGKGIKGMG
VQDGDFIEHLIYSSTHDLLLFFTNAGKVYSKKAYEIPEYGRMAKGLPVVNLLQLEKGEKV
QTVINIPENADDNYLFFITKMGTVKRTHVSEFSNIRNSGLIALTLKDGDELSNVLTTDGK
QNILIGTHLGYAVTFSENDVRAMGRTAAGVRGINLRENDYVVGSGVLGADDQVLVISEKG
YGKRTPAAEYPVKGRGGKGIKTANITEKNGPLAGVTIINSNNDVMVITTDGIMIRFKIED
VSQTGRSTMGVRLIKVNDGSQVASLTIVPTEEEQDQTGDDDEPKNE
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atggacgagaatcaaactcaagatcatagaattaaaaacgtcgatctaactagcatgatg
cgtagttcatttttggattacgcaatgtcagttattgttgcacgtgctttacctgatgtt
cgtgatggcttaaagcccgtacaacgtcgtattctttacggtatgagcgagttgggtgta
acgcctgataaaccatacaagaagagtgccagaattgttggggaagttatgggtaagttc
cacccccatggtgattcctcaatctatcttgctatggcacacatggcacaagatttctca
taccgttacatgttagtcgatggtcacggtaacttcggttctgtcgatggtgatgagcca
gccgcaatgcgttataccgaagcaagaatgagtaaaattgctgtggaaatgttgcgcgat
atcaacaaaaacaccattgattggcaaagaaactatgatgataccgaaaatgaaccggtt
gtcttacctgctagaattcctaacttgcttgttaacggtgctaacgggattgccgttggg
atgacaacaaatatcccgccacataacttgactgaagttattagtggtttgcacatgtta
atgaaaaatcctgatgctacaaccaaggacttgatgaaagttatcccaggtcccgatttt
ccaactggcggaattattatgggacgtggtggtatctaccgtgcttatgagagtggtaag
ggtaacattgttgttcgcgccaaaaccaatattgagactgaaaagagcggccgcgagcgc
ataattgtgagcgaaattccatttatggtaaacaaggctgaattggtgaagaaaattgct
gatttggctcgagaaaagactatcgatggaattactggtgtgcgtgatgaatcagaccag
acagggatgcggattaccattgatattcgccgtgatgctagtgctagcgttgttttgaat
aatttattcaagcaaactcaaatgcaggctaactttggtatgaatatggtggctattgtt
gatggtgcgccacactttttaaccttgaagcaaatgctgcaatattacttggatcaccaa
gaagatgttgtaactcgcagaacaagattcgagttagctaaggcagaggcaagagcccac
atccttgaagggttaagaatcgctctggacaatattgatgaaattgtccacattatccgc
aatagtcaatcaagtgacattgctaaagcaactttgattagccgctttggccttgatgat
aagcaatctcaggctatcttagacatgcgtttggttcgcttgactggcttggagcgcgat
aaggtagaagctgaatacaaggaattacaagctaaaattgctgactacaaagatattttg
gctaagcctgagagaattgaccaaattatctatgacgaattgcttgatattcaaaaacga
ttcggtgataagcgaagaaccgaaattggtgctagcgaagtcgtttcaattgaagatgaa
gatttgattgaaaagcaaaatattctgttgacggttacccataacggctatattaagaga
atgccaattcaggaatttaagactcaaaaccgtggtggtaaaggtatcaagggaatgggt
gtacaagatggcgactttattgagcatttgatttactcaagtacgcacgatctattactc
ttcttcaccaatgccggcaaggtttactctaagaaggcctatgaaattcctgaatatggc
cgtatggctaaaggcttaccagtagtaaatcttttgcaattggaaaagggagaaaaggtt
caaacagtcattaacattccagaaaatgcggatgacaattacttgttctttattaccaag
atgggtaccgttaaacggacacacgttagcgaattttctaatattagaaatagtggtcta
attgccttaaccttgaaggatggcgacgaattgagtaatgttttgactactgatggtaag
caaaatatcttgatcggaacgcatttaggttatgcggtaacctttagtgaaaacgatgtc
cgggcaatgggtagaactgctgcgggtgttcgcggaatcaatttaagagagaatgactat
gtagttggatctggcgttttaggtgctgatgatcaagtcttggtaatctctgaaaagggc
tatggcaaacggacgccagccgcagaatatccagttaaaggccgtggcggtaaaggcatt
aagactgccaatattactgaaaagaatggtcctttggccggcgtaacaatcatcaactca
aataatgatgttatggtaattactactgatgggattatgattcgcttcaagattgaggat
gtttctcaaactggtcgtagtacaatgggcgttcgcttaattaaagtcaatgacggcagt
caggttgcaagcttaactattgttccgactgaagaagaacaagatcaaactggtgacgat
gacgagcccaaaaatgaataa
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