Lactobacillus crispatus: LCRIS_00231
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Entry
LCRIS_00231 CDS
T01222
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase, delta subunit
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
lcr
Lactobacillus crispatus
Pathway
lcr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lcr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LCRIS_00231 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcr03021
]
LCRIS_00231 (rpoE)
03400 DNA repair and recombination proteins [BR:
lcr03400
]
LCRIS_00231 (rpoE)
Transcription machinery [BR:
lcr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LCRIS_00231 (rpoE)
DNA repair and recombination proteins [BR:
lcr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LCRIS_00231 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
DUF3632
TPR_20
TPR_TTI1_C
Motif
Other DBs
NCBI-ProteinID:
CBL49678
UniProt:
D5H0Z3
LinkDB
All DBs
Position
237992..238549
Genome browser
AA seq
185 aa
AA seq
DB search
MGLDKFKDKNRNELSMIEVARAILEDNGKRMAFADIVNAVQKYLNKSDEEIRERLPQFYT
NMNTDGEFISMGENVWALRSWFPYESVDEEVNHPEDEEEDDSRKHHKKVNAFLASATGDD
DIIDYDNDDPEDDDLDATDDDTDDDYGDEDSDYDEDNDDTDDVLPDGIEGQLSQLNDDDD
DDEDN
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
gtgggattagacaaatttaaagacaaaaatcgcaatgaattgtcaatgatcgaagttgct
cgtgcaattttggaagacaatggcaagagaatggcatttgccgatattgttaatgccgta
caaaaatacttaaataagagtgacgaagaaattcgtgaacgtttaccacaattttatact
aatatgaacactgatggtgaatttatctcaatgggtgaaaatgtttgggcacttcgttca
tggttcccatatgaatcagttgatgaagaagttaaccaccctgaggatgaagaagaagac
gattcacgtaagcaccataagaaggttaatgccttcttagctagtgcaactggtgatgat
gacattatcgactacgataacgatgatccagaagatgacgacttagacgccacagacgat
gatactgatgacgattatggcgacgaagattctgattatgatgaagacaacgacgatact
gatgatgtattgccagatggcattgaaggtcaattgtcacaattaaatgatgatgatgat
gacgacgaagataattaa
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