Lactobacillus crispatus: LCRIS_00347
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Entry
LCRIS_00347 CDS
T01222
Symbol
radA
Name
(GenBank) DNA repair protein radA
KO
K04485
DNA repair protein RadA/Sms
Organism
lcr
Lactobacillus crispatus
Brite
KEGG Orthology (KO) [BR:
lcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcr03400
]
LCRIS_00347 (radA)
DNA repair and recombination proteins [BR:
lcr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LCRIS_00347 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DnaB_C
ChlI
DUF7125
Lon_C
AAA
nSTAND3
AAA_14
SLFN-g3_helicase
GvpD_P-loop
AAA_16
AAA_24
nSTAND_NTPase5
RecA_N
AAA_22
DUF7129
NTPase_1
ABC_tran
NACHT
RUBY_RBDX
ATPase_2
RNA_helicase
NB-ARC
NPHP3_N
AAA_5
CbiA
KdpD
AAA_7
DUF2642
DUF4776
KTI12
AAA_19
HypA
RuvB_N
Motif
Other DBs
NCBI-ProteinID:
CBL49794
UniProt:
D5H1A9
LinkDB
All DBs
Position
345774..347150
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AA seq
458 aa
AA seq
DB search
MARVKTQYKCRSCGYISASYLGRCPNCGAWNQFEKETEEVQKRSTKATASRLIQKTGLNE
PVKLDKIKAEKEERIVTKSEELNRVLGGGIVPGSLVLIGGDPGIGKSTLMLQIMSDLSEK
YKVLYVSGEESANQIKLRADRLGVGQSNMLLYPETDMHDIREQINDVKPDFVVIDSIQTM
NEPSLDSMTGSASQVREVTSELMKIAKMDAITVFVIGHVTKEGAIAGPKILEHMVDTVLY
FEGDEHHSYRILHSVKNRFGAANEIGMFEMVNEGLREVTNPSSIFLDQRLPNSTGSAVVV
SLEGTRPLLAEIQALVTPTAFGYAKRTTSGISFNKASLLLAVLEKRGNLMLQNQDVYLTA
TGGIKLNEPAIDLAIAMAVASSYTDKEISPTDCFVGEVGLTGEVRRVDKIDARVKEAAKV
GFKRIFIPRHNMYSGLKDHGIEVIPVSSIPQALKLVFG
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggctagagtaaaaacacaatataagtgtcgttcttgcggctatatttcggcaagttat
ttaggccgctgtcctaactgtggtgcctggaatcaatttgaaaaagaaactgaagaagtg
caaaagcgttctactaaggcaactgctagtcgtttgattcagaagactggattaaatgaa
ccggtaaagctggataagattaaagctgaaaaagaagaacgaattgtcactaaatctgag
gaattaaaccgcgttttaggtggtggtattgtgccaggctcactagttttaattggtgga
gatcccggaattggtaagtcaaccttgatgttacaaattatgagtgacttatctgaaaaa
tataaggtgctttacgtttcgggagaagaatcagctaaccaaatcaaattgcgggctgac
cgactgggtgtaggtcaaagtaatatgctcttatatccagagactgacatgcatgatatt
cgcgaacaaatcaatgatgttaagcctgactttgttgtaatcgactccattcaaactatg
aatgaaccaagtcttgattcgatgactggctctgcctcacaggttcgtgaagtaacaagt
gaattaatgaaaattgccaagatggatgccattacagtttttgttatcggtcacgttaca
aaagagggtgcgattgctgggcctaagatcttggaacatatggtggataccgttctctat
tttgaaggggatgaacaccattcttaccgaattttgcattctgttaaaaaccgttttgga
gcagcaaacgaaattggaatgtttgaaatggttaatgaaggcttaagagaggtaactaat
ccatcatcaatttttctggaccaaagattacctaattctactggctctgctgtggtggta
tcgcttgaaggaactaggccacttttagcagaaattcaagctttggttactccgacagct
tttggctatgctaaaaggaccacgtcaggtattagttttaacaaagcttcattgctgcta
gcggtgcttgaaaagcggggaaacttaatgttgcagaatcaagatgtctatttgactgca
actggtgggattaaattgaatgaaccagcaattgatttagcaattgccatggcagttgca
tccagttataccgataaagaaatttcgccgacagattgttttgtaggcgaagtgggctta
actggtgaagttcgccgagttgataaaatcgatgcacgagtaaaagaagcggctaaagta
gggtttaagcggatctttattccacggcataatatgtattctggattaaaagatcatggc
attgaagtaattcccgtttcgagtattccccaagctttaaaattagtttttggctag
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