Lactobacillus crispatus: LCRIS_00404
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Entry
LCRIS_00404 CDS
T01222
Symbol
groEL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lcr
Lactobacillus crispatus
Pathway
lcr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lcr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LCRIS_00404 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcr03019
]
LCRIS_00404 (groEL)
03110 Chaperones and folding catalysts [BR:
lcr03110
]
LCRIS_00404 (groEL)
03029 Mitochondrial biogenesis [BR:
lcr03029
]
LCRIS_00404 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcr04147
]
LCRIS_00404 (groEL)
Enzymes [BR:
lcr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LCRIS_00404 (groEL)
Messenger RNA biogenesis [BR:
lcr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LCRIS_00404 (groEL)
Chaperones and folding catalysts [BR:
lcr03110
]
Heat shock proteins
HSP60 / Chaperonin
LCRIS_00404 (groEL)
Mitochondrial biogenesis [BR:
lcr03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LCRIS_00404 (groEL)
Exosome [BR:
lcr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LCRIS_00404 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
LCRIS_00404 (groEL)
Exosomal proteins of breast cancer cells
LCRIS_00404 (groEL)
Exosomal proteins of colorectal cancer cells
LCRIS_00404 (groEL)
Exosomal proteins of bladder cancer cells
LCRIS_00404 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
IFT57
Motif
Other DBs
NCBI-ProteinID:
CBL49851
UniProt:
D5H1G6
LinkDB
All DBs
Position
391450..393075
Genome browser
AA seq
541 aa
AA seq
DB search
MAKDIKFSENARRSLLKGVNKLADTVKTTIGPKGRNVVLEQSYGNPDITNDGVTIAKSIE
LKDHYENMGAKLVAEAAQKTNDIAGDGTTTATVLTQAITNEGMKNVTAGANPVGIRRGIE
KATEAAVNELHKISHKVESRDQIANVAAVSSSSKEVGNLIADAMEKVGHDGVITIEDSRG
INTELSVVEGMQFDRGYLSQYMVTDNDKMEADLDNPYILITDKKISNIQDILPLLQEIVQ
QGKSLLIIADDVTGEALPTLVLNKIRGTFNVVAVKAPGFGDRRKAQLQDIAALTGGTVIT
DDLGLELKDTKIDQLGQARRVTVTKDSTTIVDGAGSKDAIQEREDSIRKQIEESTSDFDK
KKLQERLAKLTGGVAVIHVGAATETELKERRYRIEDALNSTRAAVDEGYVAGGGTALVDV
EKAINDLKADTADENTGIQIVLRALSAPVRQIAENAGKNGEVVLNHLLKQENEIGYNAAT
DTWENMVDAGIIDPTKVTRTALQNAASIAALLLTTEAVVAEIPEEKPANPAPQAGAPGMG
M
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatattaaattctcagaaaatgcaagacgttctcttttaaagggtgttaat
aagttagctgatactgttaagactactattggtcctaagggtagaaacgttgttttggaa
caaagttacggcaaccctgacatcactaacgatggtgttaccattgcaaagtccatcgag
ttaaaggaccactacgaaaacatgggtgctaaacttgttgctgaagctgctcaaaagact
aatgatattgctggtgacggtactactaccgcaactgttttgactcaagcaattactaat
gaaggtatgaagaacgtaactgctggtgctaacccagttggcattcgtcgtggtattgaa
aaagctactgaagctgctgttaatgaattgcacaagattagccacaaggttgaatcaaga
gaccaaattgctaacgtagctgcagtttcatcatcttcaaaggaagttggtaacttaatc
gctgacgctatggaaaaggttggtcacgatggcgttatcactattgaagattcacgtggt
atcaacactgaactttcagtagttgaaggtatgcaatttgatcgtggttacttatcacaa
tacatggtaactgacaacgataagatggaagcagatcttgataatccttacattttgatc
actgacaagaagatctcaaacattcaagatatcttgccacttcttcaagaaattgttcaa
caaggtaagtcattattgatcattgctgatgacgttactggtgaagctcttccaacactt
gtattgaacaagattcgtggtaccttcaacgttgtagctgttaaggctcctggctttggt
gaccgtcgtaaggctcagttacaagatattgctgctttgactggtggtactgtgattact
gatgacttaggtcttgaattaaaggacactaagattgatcaattaggtcaagctcgtcgt
gtaactgtaaccaaggactcaactactattgttgacggtgctggttcaaaggatgctatt
caagaacgtgaagattcaatcagaaagcaaattgaagaatcaacttcagactttgacaag
aagaagcttcaagaacgtcttgctaagttaactggtggtgtagctgttatccacgtaggt
gctgctactgaaaccgaattgaaggaacgtcgttacagaattgaagacgctttgaactca
actcgtgccgctgttgacgaaggttacgttgctggtggtggtactgctttagtagacgtt
gagaaggctatcaatgatcttaaggctgatactgcagatgaaaatactggtatccaaatc
gtattaagagctttgtcagcaccagttcgtcaaattgctgaaaacgcaggtaagaatggt
gaagttgttttgaaccacttactcaagcaagaaaacgaaattggctacaatgctgctact
gatacttgggaaaacatggtagatgctggtatcattgatccaaccaaggtaaccagaacc
gctttgcaaaatgctgcttcaattgccgctcttctgcttactactgaagctgttgttgca
gaaattcctgaagaaaagccagctaacccagctccacaagctggtgcaccaggaatgggt
atgtaa
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