Lactobacillus crispatus: LCRIS_00693
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Entry
LCRIS_00693 CDS
T01222
Name
(GenBank) Uncharacterised P-loop ATPase protein UPF0042
KO
K06958
RNase adapter protein RapZ
Organism
lcr
Lactobacillus crispatus
Brite
KEGG Orthology (KO) [BR:
lcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcr03019
]
LCRIS_00693
Messenger RNA biogenesis [BR:
lcr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LCRIS_00693
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_18
AAA_33
AAA_22
nSTAND3
SKI
AAA_16
Myosin_head
Rad17
SLFN-g3_helicase
Zeta_toxin
NPHP3_N
APS_kinase
Peptidase_C54
Motif
Other DBs
NCBI-ProteinID:
CBL50140
UniProt:
D5H2A5
LinkDB
All DBs
Position
697592..698473
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AA seq
293 aa
AA seq
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MADEKKQLLIVTGMSGAGKTVVAHDLEDMGYFVVDNLPPTLLGSFWDLINNSNDFHKVAV
VIDLRVKTFYRDLLDEVNSLEDNGNVQATILFLDASDDVLVARYKETRRLPPLANNGKGR
LLDGIQEERRILMPIKNRSNYIIDTSNLSTKELKQKLINTFSDRKRQPFSIEVMSFGFKY
GMPIDADIVMDVRFLPNPFYISELRPFTGLDKRVFDYVMNKEETQVFYKKLLDLLETAIP
GYIKEGKEKLTIAIGCTGGQHRSVSIAQQLARDLAKKYPVDITHREVSRYIRK
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgagaaaaaacaattattaatagtcacaggcatgagcggagcaggtaaaact
gtggtcgctcatgacttagaagatatgggctactttgtagtcgataatcttcctccaact
ttattaggtagtttttgggatttaattaataattccaatgactttcataaggtagccgta
gtaattgatttacgagttaagacattttatcgcgatttattggatgaagttaattcactt
gaagataatggcaatgtgcaagctactatcctatttttggatgcttccgatgatgtcttg
gttgctcgttataaagaaacaaggcgtcttccgcctttagccaataatggcaaaggtcgc
ttgcttgatggcattcaagaagaacgtcgtattttaatgccaattaaaaatagatcaaat
tatattatcgatacgtcaaacttgtcgactaaggaattaaagcaaaaattaatcaataca
tttagtgatcgcaagcggcagccattttcaattgaagtgatgtcatttggctttaagtat
gggatgccaattgatgcagatattgtaatggatgtgcgttttttgcctaacccattttat
atttcagaattaagaccatttacgggactggacaagcgtgtatttgactatgtgatgaac
aaagaagaaacacaggtcttttataaaaaattgcttgatttgcttgaaacagctatccct
ggatatatcaaagagggaaaggaaaagttgaccattgcaattggttgtactgggggtcaa
caccggagtgtttcaattgcccaacagttggcacgagatttagctaaaaaatatccagtc
gatattactcaccgtgaagtgagtcgttatattagaaagtag
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