Lactobacillus crispatus: LCRIS_00824
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Entry
LCRIS_00824 CDS
T01222
Symbol
pbpB
Name
(GenBank) Penicillin-binding protein
KO
K08724
penicillin-binding protein 2B
Organism
lcr
Lactobacillus crispatus
Pathway
lcr00550
Peptidoglycan biosynthesis
lcr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lcr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LCRIS_00824 (pbpB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lcr01011
]
LCRIS_00824 (pbpB)
Peptidoglycan biosynthesis and degradation proteins [BR:
lcr01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
LCRIS_00824 (pbpB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
Motif
Other DBs
NCBI-ProteinID:
CBL50271
UniProt:
D5H2N6
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All DBs
Position
825124..827205
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AA seq
693 aa
AA seq
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MAVALVFLVFTARFLYIGISKTVNGQNLSQRTKQLYKRNQVIKATRGTIYDRNGLTIAED
SHLYTVYAILDKTSINYKNKPEYVVNKTKTAEKLAQVLPLSAEKIYQYLTPKKKVFQVQF
GTGGSGLTLRQKKKIEAMKLPGIKFLETPSRLYPNGVFASHTVGLAQPIWNKKTNAQNLV
GTMGIEAYFNKTLTGTDGYRISSVDASEYQLPNSNQVYKPAKNGNNLYLTLDSQLQSLLE
TRLSEVQKTYRPTSITATVEDMKTGKILAASQRPTFNPQTMKGLTKSYRDILVQDTYEPG
SVFKILSFAAVVNSGNYNPNEYYRSGSVNIAGSTIHDWLTSGWGTIPFSQAFERSSNTGF
VKLEQKMGAKTWKKYLKKFRIGEKTGVSLPGEQPGMISFKTPVDQAITAFGQGVTVNVMQ
MMQAYSSLANNGQMVKPQLVNKITDSDGNTIQGYQIKKVGTPVYSAKTRKVIVANMRKVL
NKQSGTGSAYKMGNADIAVKTGTAQIANPKGGGYLKGDSNYIFSVVGIYPASKPRYCIYL
TIKQPHLIGGGAEKILASIFKPMMQRIISIAKNDDVSTTVKVPNLKAKTVAQAESQTKQL
GLNLVKIGSGDRISNQGVKSGEKLESGSKIFVNTSGKIICPDMTGWTYSDLHQFASLTDI
KLSIKGTGTVASQSVAKGTELKAGRKLNIKLKE
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggccgtggctttggtttttcttgtatttacggctagatttttatatatcggaatatcc
aagacagttaatggtcaaaatttatcacagcgtaccaagcagctttataagcgcaatcag
gtaattaaggccacgcgagggactatctatgatcgaaatggattaacaattgcggaagat
tcgcatttgtatacggtttatgcgattttagataagacttcgatcaactataagaataaa
cctgagtatgtagtgaataaaaccaagacagctgaaaagctggcacaggttttaccattg
tctgcggaaaaaatttaccaatatttaaccccaaaaaagaaggtctttcaggtacaattt
gggacaggtggtagtggactgacattgcgacaaaagaaaaagattgaagcaatgaaatta
ccaggaattaagttcttggaaacaccatctagattgtatcccaatggtgtttttgcatca
catactgttggattggctcaaccaatttggaataaaaagactaatgcacaaaacttagtc
ggaactatgggaattgaagcttatttcaataagactttgactgggacggatggttaccgg
atttcttcggtagatgcatctgaatatcagcttccaaatagtaatcaagtttataagcct
gctaaaaatggaaacaacttgtatttaacactagattctcagttgcagagtttgcttgag
actcgcttaagtgaagtacagaaaacttaccgaccaacatcaattactgctacagttgaa
gacatgaagactgggaaaattttggcagcttctcaacgccctacttttaatcctcaaact
atgaagggattaactaagtcgtatcgggatatcttggtgcaagatacttatgaaccagga
tcagttttcaagattttgtcattcgctgcagtagtcaacagtggcaattacaaccctaat
gagtattaccggtctggttctgttaatattgctggttccactatccatgactggctgact
tcaggttggggcacaattccattttctcaagcttttgaacgttcaagtaacactggtttt
gttaagttagaacaaaagatgggtgctaagacttggaagaagtacttgaagaagttcaga
attggtgaaaagacgggagtcagtcttccaggtgagcagccggggatgatttcgtttaaa
acaccagttgaccaagcaattactgcttttggtcaaggcgttactgtgaatgtaatgcaa
atgatgcaagcttatagttctttggctaataatggtcaaatggtaaagccacagttggtt
aataaaattactgactctgatggcaatacaattcaaggctatcagattaaaaaggttggt
actccagtatatagtgctaaaaccagaaaagtaattgtggctaacatgagaaaggtactt
aataagcaatcaggaactggttctgcttataagatgggaaacgccgatattgctgttaag
acggggactgcgcagattgctaaccctaaaggtggaggttatctaaagggtgatagtaat
tatattttctctgttgttggtatttatccagcaagtaaaccacgttactgtatttatttg
acaattaagcaaccacacttaattggaggcggagctgaaaagattttggcttcaattttc
aaaccgatgatgcagagaatcatttcgattgctaaaaatgatgatgtatcaactactgta
aaagtaccaaacttaaaagctaaaaccgttgcacaagctgaaagtcaaactaagcaatta
ggacttaatttggttaaaattggtagcggtgatcggattagcaatcaaggagttaagagt
ggcgaaaagttagagtctgggtctaagatttttgtcaatacttcaggaaaaatcatttgt
cctgatatgacgggatggacttatagtgatttacaccaatttgctagtttgacagatatt
aagttaagcataaaaggtaccggcactgttgcgagtcaaagcgtggctaaaggaacagaa
ttaaaagctggaagaaaattaaacattaagttaaaggagtaa
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